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Items 1 - 20 of 137
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1:

Abundant protein domains occur in proportion to proteome size.

Malek JA.

Genome Biol. 2001;2(9):RESEARCH0039. Epub 2001 Aug 24.

PMID: 11574058 [PubMed - indexed for MEDLINE]

2:

Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes.

Pandey R, Müller A, Napoli CA, Selinger DA, Pikaard CS, Richards EJ, Bender J, Mount DW, Jorgensen RA.

Nucleic Acids Res. 2002 Dec 1;30(23):5036-55.

PMID: 12466527 [PubMed - indexed for MEDLINE]

3:

Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs.

Yu H, Luscombe NM, Lu HX, Zhu X, Xia Y, Han JD, Bertin N, Chung S, Vidal M, Gerstein M.

Genome Res. 2004 Jun;14(6):1107-18.

PMID: 15173116 [PubMed - indexed for MEDLINE]

4:

The ABC transporter gene family of Caenorhabditis elegans has implications for the evolutionary dynamics of multidrug resistance in eukaryotes.

Sheps JA, Ralph S, Zhao Z, Baillie DL, Ling V.

Genome Biol. 2004;5(3):R15. Epub 2004 Feb 11.

PMID: 15003118 [PubMed - indexed for MEDLINE]

5:

Comparative analysis of protein domain organization.

Ye Y, Godzik A.

Genome Res. 2004 Mar;14(3):343-53.

PMID: 14993202 [PubMed - indexed for MEDLINE]

6:

Intrinsic disorder is a common feature of hub proteins from four eukaryotic interactomes.

Haynes C, Oldfield CJ, Ji F, Klitgord N, Cusick ME, Radivojac P, Uversky VN, Vidal M, Iakoucheva LM.

PLoS Comput Biol. 2006 Aug 4;2(8):e100. Epub 2006 Jun 23.

PMID: 16884331 [PubMed - indexed for MEDLINE]

7:

Reconstitution in vitro of the GDP-fucose biosynthetic pathways of Caenorhabditis elegans and Drosophila melanogaster.

Rhomberg S, Fuchsluger C, Rendić D, Paschinger K, Jantsch V, Kosma P, Wilson IB.

FEBS J. 2006 May;273(10):2244-56.

PMID: 16650000 [PubMed - indexed for MEDLINE]

8:

Molecular phylogeny of the kelch-repeat superfamily reveals an expansion of BTB/kelch proteins in animals.

Prag S, Adams JC.

BMC Bioinformatics. 2003 Sep 17;4:42. Epub 2003 Sep 17.

PMID: 13678422 [PubMed - indexed for MEDLINE]

9:

Comprehensive analysis of orthologous protein domains using the HOPS database.

Storm CE, Sonnhammer EL.

Genome Res. 2003 Oct;13(10):2353-62.

PMID: 14525933 [PubMed - indexed for MEDLINE]

10:

A general tendency for conservation of protein length across eukaryotic kingdoms.

Wang D, Hsieh M, Li WH.

Mol Biol Evol. 2005 Jan;22(1):142-7. Epub 2004 Sep 15.

PMID: 15371528 [PubMed - indexed for MEDLINE]

11:

START lipid/sterol-binding domains are amplified in plants and are predominantly associated with homeodomain transcription factors.

Schrick K, Nguyen D, Karlowski WM, Mayer KF.

Genome Biol. 2004;5(6):R41. Epub 2004 May 27.

PMID: 15186492 [PubMed - indexed for MEDLINE]

12:

Amino acid runs in eukaryotic proteomes and disease associations.

Karlin S, Brocchieri L, Bergman A, Mrazek J, Gentles AJ.

Proc Natl Acad Sci U S A. 2002 Jan 8;99(1):333-8.

PMID: 11782551 [PubMed - indexed for MEDLINE]

13:

Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.

Riechmann JL, Heard J, Martin G, Reuber L, Jiang C, Keddie J, Adam L, Pineda O, Ratcliffe OJ, Samaha RR, Creelman R, Pilgrim M, Broun P, Zhang JZ, Ghandehari D, Sherman BK, Yu G.

Science. 2000 Dec 15;290(5499):2105-10.

PMID: 11118137 [PubMed - indexed for MEDLINE]

14:

The phylogenetic diversity of eukaryotic transcription.

Coulson RM, Ouzounis CA.

Nucleic Acids Res. 2003 Jan 15;31(2):653-60.

PMID: 12527774 [PubMed - indexed for MEDLINE]

15:

Microbial genes in the human genome: lateral transfer or gene loss?

Salzberg SL, White O, Peterson J, Eisen JA.

Science. 2001 Jun 8;292(5523):1903-6. Epub 2001 May 17.

PMID: 11358996 [PubMed - indexed for MEDLINE]

16:

Whole proteome pI values correlate with subcellular localizations of proteins for organisms within the three domains of life.

Schwartz R, Ting CS, King J.

Genome Res. 2001 May;11(5):703-9.

PMID: 11337469 [PubMed - indexed for MEDLINE]

17:

Structural characterization of the human proteome.

Müller A, MacCallum RM, Sternberg MJ.

Genome Res. 2002 Nov;12(11):1625-41.

PMID: 12421749 [PubMed - indexed for MEDLINE]

18:

Deducing the origin of soluble adenylyl cyclase, a gene lost in multiple lineages.

Roelofs J, Van Haastert PJ.

Mol Biol Evol. 2002 Dec;19(12):2239-46.

PMID: 12446814 [PubMed - indexed for MEDLINE]

19:

Birth and death of protein domains: a simple model of evolution explains power law behavior.

Karev GP, Wolf YI, Rzhetsky AY, Berezovskaya FS, Koonin EV.

BMC Evol Biol. 2002 Oct 14;2(1):18.

PMID: 12379152 [PubMed - indexed for MEDLINE]

20:

Synaptotagmin gene content of the sequenced genomes.

Craxton M.

BMC Genomics. 2004 Jul 6;5(1):43.

PMID: 15238157 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 137
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