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Items 1 - 20 of 114
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1:

Flip-flop around the origin and terminus of replication in prokaryotic genomes.

Mackiewicz P, Mackiewicz D, Kowalczuk M, Cebrat S.

Genome Biol. 2001;2(12):INTERACTIONS1004. Epub 2001 Nov 15. No abstract available.

PMID: 11790247 [PubMed - indexed for MEDLINE]

2:

Dynamics of genome rearrangement in bacterial populations.

Darling AE, Miklós I, Ragan MA.

PLoS Genet. 2008 Jul 18;4(7):e1000128.

PMID: 18650965 [PubMed - indexed for MEDLINE]

3:

Evidence for symmetric chromosomal inversions around the replication origin in bacteria.

Eisen JA, Heidelberg JF, White O, Salzberg SL.

Genome Biol. 2000;1(6):RESEARCH0011. Epub 2000 Dec 4.

PMID: 11178265 [PubMed - indexed for MEDLINE]

4:

A study on the correlation of nucleotide skews and the positioning of the origin of replication: different modes of replication in bacterial species.

Nikolaou C, Almirantis Y.

Nucleic Acids Res. 2005 Nov 30;33(21):6816-22. Print 2005.

PMID: 16321966 [PubMed - indexed for MEDLINE]

5:

Quantitative determination of gene strand bias in prokaryotic genomes.

de Carvalho MO, Ferreira HB.

Genomics. 2007 Dec;90(6):733-40. Epub 2007 Oct 24.

PMID: 17920810 [PubMed - indexed for MEDLINE]

6:

Selection for chromosome architecture in bacteria.

Hendrickson H, Lawrence JG.

J Mol Evol. 2006 May;62(5):615-29. Epub 2006 Apr 11.

PMID: 16612541 [PubMed - indexed for MEDLINE]

7:

Analyzing genomes with cumulative skew diagrams.

Grigoriev A.

Nucleic Acids Res. 1998 May 15;26(10):2286-90.

PMID: 9580676 [PubMed - indexed for MEDLINE]

8:

Genome plasticity in Lactococcus lactis.

Campo N, Dias MJ, Daveran-Mingot ML, Ritzenthaler P, Le Bourgeois P.

Antonie Van Leeuwenhoek. 2002 Aug;82(1-4):123-32. Review.

PMID: 12369184 [PubMed - indexed for MEDLINE]

10:

Replication-associated gene dosage effects shape the genomes of fast-growing bacteria but only for transcription and translation genes.

Couturier E, Rocha EP.

Mol Microbiol. 2006 Mar;59(5):1506-18.

PMID: 16468991 [PubMed - indexed for MEDLINE]

11:

DNA rearrangements and phenotypic switching in prokaryotes.

Dybvig K.

Mol Microbiol. 1993 Nov;10(3):465-71. Review.

PMID: 7968525 [PubMed - indexed for MEDLINE]

12:

The replication-related organization of bacterial genomes.

Rocha EP.

Microbiology. 2004 Jun;150(Pt 6):1609-27. Review.

PMID: 15184548 [PubMed - indexed for MEDLINE]

13:

Replication intermediates as substrates for DNA rearrangements.

Painter RB, Kapp LN.

Mutat Res. 1991 Jan;262(1):21-3.

PMID: 1986280 [PubMed - indexed for MEDLINE]

15:

Genome-wide coorientation of replication and transcription reduces adverse effects on replication in Bacillus subtilis.

Wang JD, Berkmen MB, Grossman AD.

Proc Natl Acad Sci U S A. 2007 Mar 27;104(13):5608-13. Epub 2007 Mar 19.

PMID: 17372224 [PubMed - indexed for MEDLINE]

16:

Noise-reduction filtering for accurate detection of replication termini in bacterial genomes.

Arakawa K, Saito R, Tomita M.

FEBS Lett. 2007 Jan 23;581(2):253-8. Epub 2006 Dec 18.

PMID: 17188685 [PubMed - indexed for MEDLINE]

18:

Measuring genome divergence in bacteria: a case study using chlamydian data.

Dalevi DA, Eriksen N, Eriksson K, Andersson SG.

J Mol Evol. 2002 Jul;55(1):24-36.

PMID: 12165840 [PubMed - indexed for MEDLINE]

19:

Complete genome sequence of Rickettsia typhi and comparison with sequences of other rickettsiae.

McLeod MP, Qin X, Karpathy SE, Gioia J, Highlander SK, Fox GE, McNeill TZ, Jiang H, Muzny D, Jacob LS, Hawes AC, Sodergren E, Gill R, Hume J, Morgan M, Fan G, Amin AG, Gibbs RA, Hong C, Yu XJ, Walker DH, Weinstock GM.

J Bacteriol. 2004 Sep;186(17):5842-55.

PMID: 15317790 [PubMed - indexed for MEDLINE]

20:

Replication-associated strand asymmetries in vertebrate genomes and implications for replicon size, DNA replication origin, and termination.

Hou WR, Wang HF, Niu DK.

Biochem Biophys Res Commun. 2006 Jun 16;344(4):1258-62. Epub 2006 Apr 24.

PMID: 16650814 [PubMed - indexed for MEDLINE]

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