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Items 1 - 20 of 209
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1:

Software and methods for oligonucleotide and cDNA array data analysis.

Zapala MA, Lockhart DJ, Pankratz DG, Garcia AJ, Barlow C, Lockhart DJ.

Genome Biol. 2002;3(6):SOFTWARE0001. Epub 2002 May 23.

PMID: 12093384 [PubMed - indexed for MEDLINE]

2:

Resource and hardware options for microarray-based experimentation.

Affara NA.

Brief Funct Genomic Proteomic. 2003 Apr;2(1):7-20. Review.

PMID: 15239939 [PubMed - indexed for MEDLINE]

3:

ArrayQuest: a web resource for the analysis of DNA microarray data.

Argraves GL, Jani S, Barth JL, Argraves WS.

BMC Bioinformatics. 2005 Dec 1;6:287.

PMID: 16321157 [PubMed - indexed for MEDLINE]

4:

AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data.

Lu G, Nguyen TV, Xia Y, Fromm M.

BMC Bioinformatics. 2006 Dec 12;7 Suppl 4:S26.

PMID: 17217519 [PubMed - indexed for MEDLINE]

5:

IGG: A tool to integrate GeneChips for genetic studies.

Li MX, Jiang L, Ho SL, Song YQ, Sham PC.

Bioinformatics. 2007 Nov 15;23(22):3105-7. Epub 2007 Sep 14.

PMID: 17872914 [PubMed - indexed for MEDLINE]

6:

GeneBins: a database for classifying gene expression data, with application to plant genome arrays.

Goffard N, Weiller G.

BMC Bioinformatics. 2007 Mar 12;8:87.

PMID: 17349060 [PubMed - indexed for MEDLINE]

7:

HDBStat!: a platform-independent software suite for statistical analysis of high dimensional biology data.

Trivedi P, Edwards JW, Wang J, Gadbury GL, Srinivasasainagendra V, Zakharkin SO, Kim K, Mehta T, Brand JP, Patki A, Page GP, Allison DB.

BMC Bioinformatics. 2005 Apr 6;6:86.

PMID: 15813968 [PubMed - indexed for MEDLINE]

8:

AVA: visual analysis of gene expression microarray data.

Zhou Y, Liu J.

Bioinformatics. 2003 Jan 22;19(2):293-4.

PMID: 12538256 [PubMed - indexed for MEDLINE]

9:

GeneXplorer: an interactive web application for microarray data visualization and analysis.

Rees CA, Demeter J, Matese JC, Botstein D, Sherlock G.

BMC Bioinformatics. 2004 Oct 1;5:141.

PMID: 15458579 [PubMed - indexed for MEDLINE]

10:

HugeIndex: a database with visualization tools for high-density oligonucleotide array data from normal human tissues.

Haverty PM, Weng Z, Best NL, Auerbach KR, Hsiao LL, Jensen RV, Gullans SR.

Nucleic Acids Res. 2002 Jan 1;30(1):214-7.

PMID: 11752297 [PubMed - indexed for MEDLINE]

11:

affy--analysis of Affymetrix GeneChip data at the probe level.

Gautier L, Cope L, Bolstad BM, Irizarry RA.

Bioinformatics. 2004 Feb 12;20(3):307-15.

PMID: 14960456 [PubMed - indexed for MEDLINE]

12:

IlluminaGUI: graphical user interface for analyzing gene expression data generated on the Illumina platform.

Schultze JL, Eggle D.

Bioinformatics. 2007 Jun 1;23(11):1431-3. Epub 2007 Mar 23.

PMID: 17384020 [PubMed - indexed for MEDLINE]

13:

MILANO--custom annotation of microarray results using automatic literature searches.

Rubinstein R, Simon I.

BMC Bioinformatics. 2005 Jan 20;6:12.

PMID: 15661078 [PubMed - indexed for MEDLINE]

14:

Reproducibility of gene expression across generations of Affymetrix microarrays.

Nimgaonkar A, Sanoudou D, Butte AJ, Haslett JN, Kunkel LM, Beggs AH, Kohane IS.

BMC Bioinformatics. 2003 Jun 25;4:27. Epub 2003 Jun 25.

PMID: 12823866 [PubMed - indexed for MEDLINE]

15:

MARS: microarray analysis, retrieval, and storage system.

Maurer M, Molidor R, Sturn A, Hartler J, Hackl H, Stocker G, Prokesch A, Scheideler M, Trajanoski Z.

BMC Bioinformatics. 2005 Apr 18;6:101.

PMID: 15836795 [PubMed - indexed for MEDLINE]

16:

Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis.

Wilson CL, Miller CJ.

Bioinformatics. 2005 Sep 15;21(18):3683-5. Epub 2005 Aug 2.

PMID: 16076888 [PubMed - indexed for MEDLINE]

17:

Application of four dyes in gene expression analyses by microarrays.

Staal YC, van Herwijnen MH, van Schooten FJ, van Delft JH.

BMC Genomics. 2005 Jul 25;6:101.

PMID: 16042794 [PubMed - indexed for MEDLINE]

18:

Ontological analysis of gene expression data: current tools, limitations, and open problems.

Khatri P, Drăghici S.

Bioinformatics. 2005 Sep 15;21(18):3587-95. Epub 2005 Jun 30.

PMID: 15994189 [PubMed - indexed for MEDLINE]

19:

Information overload.

Dennis C.

Nature. 2002 May 2;417(6884):14. No abstract available.

PMID: 11986639 [PubMed - indexed for MEDLINE]

20:

[Transcriptomes for serial analysis of gene expression]

Marti J, Piquemal D, Manchon L, Commes T.

J Soc Biol. 2002;196(4):303-7. Review. French.

PMID: 12645300 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 209
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