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The DNA-binding region of RAG 1 is not a homeodomain.
Banerjee-Basu S, Baxevanis AD.
Genome Biol. 2002 Jul 25;3(8):INTERACTIONS1004. Epub 2002 Jul 25. Review.
PMID: 12186638 [PubMed - indexed for MEDLINE]
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The Homeodomain Resource: 2003 update.
Banerjee-Basu S, Moreland T, Hsu BJ, Trout KL, Baxevanis AD.
Nucleic Acids Res. 2003 Jan 1;31(1):304-6.
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Double-strand break formation by the RAG complex at the bcl-2 major breakpoint region and at other non-B DNA structures in vitro.
Raghavan SC, Swanson PC, Ma Y, Lieber MR.
Mol Cell Biol. 2005 Jul;25(14):5904-19.
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A plant homeodomain in RAG-2 that binds Hypermethylated lysine 4 of histone H3 is necessary for efficient antigen-receptor-gene rearrangement.
Liu Y, Subrahmanyam R, Chakraborty T, Sen R, Desiderio S.
Immunity. 2007 Oct;27(4):561-71. Epub 2007 Oct 11.
PMID: 17936034 [PubMed - indexed for MEDLINE]
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The third helix of the homeodomain of paired class homeodomain proteins acts as a recognition helix both for DNA and protein interactions.
Bruun JA, Thomassen EI, Kristiansen K, Tylden G, Holm T, Mikkola I, Bjørkøy G, Johansen T.
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Combination of a zinc finger and homeodomain required for protein-interaction.
Smith GE, Darling DS.
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Functional analysis of the basic helix-loop-helix transcription factor DEC1 in circadian regulation. Interaction with BMAL1.
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PAX6, paired domain influences sequence recognition by the homeodomain.
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The homeoprotein Alx3 contains discrete functional domains and exhibits cell-specific and selective monomeric binding and transactivation.
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