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Items 1 - 20 of 113
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1:

Ranking genes with respect to differential expression.

Broberg P.

Genome Biol. 2002 Aug 5;3(9):preprint0007. Epub 2002 Aug 5.

PMID: 12225577 [PubMed - indexed for MEDLINE]

2:

Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments.

Sartor MA, Tomlinson CR, Wesselkamper SC, Sivaganesan S, Leikauf GD, Medvedovic M.

BMC Bioinformatics. 2006 Dec 19;7:538.

PMID: 17177995 [PubMed - indexed for MEDLINE]

3:

Statistical methods for ranking differentially expressed genes.

Broberg P.

Genome Biol. 2003;4(6):R41. Epub 2003 May 29.

PMID: 12801415 [PubMed - indexed for MEDLINE]

4:

Normal uniform mixture differential gene expression detection for cDNA microarrays.

Dean N, Raftery AE.

BMC Bioinformatics. 2005 Jul 12;6:173.

PMID: 16011807 [PubMed - indexed for MEDLINE]

5:

Sex genes for genomic analysis in human brain: internal controls for comparison of probe level data extraction.

Galfalvy HC, Erraji-Benchekroun L, Smyrniotopoulos P, Pavlidis P, Ellis SP, Mann JJ, Sibille E, Arango V.

BMC Bioinformatics. 2003 Sep 8;4:37. Epub 2003 Sep 8.

PMID: 12962547 [PubMed - indexed for MEDLINE]

6:

Multiple-testing strategy for analyzing cDNA array data on gene expression.

Delongchamp RR, Bowyer JF, Chen JJ, Kodell RL.

Biometrics. 2004 Sep;60(3):774-82.

PMID: 15339301 [PubMed - indexed for MEDLINE]

7:

Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data.

Shedden K, Chen W, Kuick R, Ghosh D, Macdonald J, Cho KR, Giordano TJ, Gruber SB, Fearon ER, Taylor JM, Hanash S.

BMC Bioinformatics. 2005 Feb 10;6:26.

PMID: 15705192 [PubMed - indexed for MEDLINE]

8:

Nonparametric methods for identifying differentially expressed genes in microarray data.

Troyanskaya OG, Garber ME, Brown PO, Botstein D, Altman RB.

Bioinformatics. 2002 Nov;18(11):1454-61.

PMID: 12424116 [PubMed - indexed for MEDLINE]

9:

Operon information improves gene expression estimation for cDNA microarrays.

Xiao G, Martinez-Vaz B, Pan W, Khodursky AB.

BMC Genomics. 2006 Apr 21;7:87.

PMID: 16630355 [PubMed - indexed for MEDLINE]

10:

Construction of null statistics in permutation-based multiple testing for multi-factorial microarray experiments.

Gao X.

Bioinformatics. 2006 Jun 15;22(12):1486-94. Epub 2006 Mar 30.

PMID: 16574697 [PubMed - indexed for MEDLINE]

11:

Controlling false-negative errors in microarray differential expression analysis: a PRIM approach.

Cole SW, Galic Z, Zack JA.

Bioinformatics. 2003 Sep 22;19(14):1808-16.

PMID: 14512352 [PubMed - indexed for MEDLINE]

12:

Reproducibility-optimized test statistic for ranking genes in microarray studies.

Elo LL, Filén S, Lahesmaa R, Aittokallio T.

IEEE/ACM Trans Comput Biol Bioinform. 2008 Jul-Sep;5(3):423-31.

PMID: 18670045 [PubMed - indexed for MEDLINE]

13:

Approaches to reduce false positives and false negatives in the analysis of microarray data: applications in type 1 diabetes research.

Wu J, Lenchik NI, Gerling IC.

BMC Genomics. 2008 Sep 16;9 Suppl 2:S12.

PMID: 18831777 [PubMed - indexed for MEDLINE]

14:

An improved procedure for gene selection from microarray experiments using false discovery rate criterion.

Yang JJ, Yang MC.

BMC Bioinformatics. 2006 Jan 11;7:15.

PMID: 16405735 [PubMed - indexed for MEDLINE]

15:

Systematic learning of gene functional classes from DNA array expression data by using multilayer perceptrons.

Mateos A, Dopazo J, Jansen R, Tu Y, Gerstein M, Stolovitzky G.

Genome Res. 2002 Nov;12(11):1703-15.

PMID: 12421757 [PubMed - indexed for MEDLINE]

16:

Detecting differential expression in microarray data: comparison of optimal procedures.

Perelman E, Ploner A, Calza S, Pawitan Y.

BMC Bioinformatics. 2007 Jan 26;8:28.

PMID: 17257426 [PubMed - indexed for MEDLINE]

17:

Rank Difference Analysis of Microarrays (RDAM), a novel approach to statistical analysis of microarray expression profiling data.

Martin DE, Demougin P, Hall MN, Bellis M.

BMC Bioinformatics. 2004 Oct 11;5:148.

PMID: 15476558 [PubMed - indexed for MEDLINE]

18:

Identifying differentially expressed genes from microarray experiments via statistic synthesis.

Yang YH, Xiao Y, Segal MR.

Bioinformatics. 2005 Apr 1;21(7):1084-93. Epub 2004 Oct 28.

PMID: 15513985 [PubMed - indexed for MEDLINE]

19:

Multidimensional local false discovery rate for microarray studies.

Ploner A, Calza S, Gusnanto A, Pawitan Y.

Bioinformatics. 2006 Mar 1;22(5):556-65. Epub 2005 Dec 20.

PMID: 16368770 [PubMed - indexed for MEDLINE]

20:

Microarray expression profiling: analysis and applications.

Xiang Z, Yang Y, Ma X, Ding W.

Curr Opin Drug Discov Devel. 2003 May;6(3):384-95. Review.

PMID: 12833672 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 113
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