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Items 1 - 20 of 504
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1:

Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome.

Bergman CM, Pfeiffer BD, Rincón-Limas DE, Hoskins RA, Gnirke A, Mungall CJ, Wang AM, Kronmiller B, Pacleb J, Park S, Stapleton M, Wan K, George RA, de Jong PJ, Botas J, Rubin GM, Celniker SE.

Genome Biol. 2002;3(12):RESEARCH0086. Epub 2002 Dec 30.

PMID: 12537575 [PubMed - indexed for MEDLINE]

2:

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution.

Richards S, Liu Y, Bettencourt BR, Hradecky P, Letovsky S, Nielsen R, Thornton K, Hubisz MJ, Chen R, Meisel RP, Couronne O, Hua S, Smith MA, Zhang P, Liu J, Bussemaker HJ, van Batenburg MF, Howells SL, Scherer SE, Sodergren E, Matthews BB, Crosby MA, Schroeder AJ, Ortiz-Barrientos D, Rives CM, Metzker ML, Muzny DM, Scott G, Steffen D, Wheeler DA, Worley KC, Havlak P, Durbin KJ, Egan A, Gill R, Hume J, Morgan MB, Miner G, Hamilton C, Huang Y, Waldron L, Verduzco D, Clerc-Blankenburg KP, Dubchak I, Noor MA, Anderson W, White KP, Clark AG, Schaeffer SW, Gelbart W, Weinstock GM, Gibbs RA.

Genome Res. 2005 Jan;15(1):1-18.

PMID: 15632085 [PubMed - indexed for MEDLINE]

3:

Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura.

Berman BP, Pfeiffer BD, Laverty TR, Salzberg SL, Rubin GM, Eisen MB, Celniker SE.

Genome Biol. 2004;5(9):R61. Epub 2004 Aug 20.

PMID: 15345045 [PubMed - indexed for MEDLINE]

4:

Assessing the Drosophila melanogaster and Anopheles gambiae genome annotations using genome-wide sequence comparisons.

Jaillon O, Dossat C, Eckenberg R, Eiglmeier K, Segurens B, Aury JM, Roth CW, Scarpelli C, Brey PT, Weissenbach J, Wincker P.

Genome Res. 2003 Jul;13(7):1595-9.

PMID: 12840038 [PubMed - indexed for MEDLINE]

5:

Conservation of regulatory elements between two species of Drosophila.

Emberly E, Rajewsky N, Siggia ED.

BMC Bioinformatics. 2003 Nov 20;4:57.

PMID: 14629780 [PubMed - indexed for MEDLINE]

6:

Evolutionary rearrangement of the amylase genomic regions between Drosophila melanogaster and Drosophila pseudoobscura.

Schaeffer SW, Bernhardt MJ, Anderson WW.

J Hered. 2003 Nov-Dec;94(6):464-71.

PMID: 14691313 [PubMed - indexed for MEDLINE]

7:

GATA: a graphic alignment tool for comparative sequence analysis.

Nix DA, Eisen MB.

BMC Bioinformatics. 2005 Jan 17;6:9.

PMID: 15655071 [PubMed - indexed for MEDLINE]

8:

An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region.

Ashburner M, Misra S, Roote J, Lewis SE, Blazej R, Davis T, Doyle C, Galle R, George R, Harris N, Hartzell G, Harvey D, Hong L, Houston K, Hoskins R, Johnson G, Martin C, Moshrefi A, Palazzolo M, Reese MG, Spradling A, Tsang G, Wan K, Whitelaw K, Celniker S, et al.

Genetics. 1999 Sep;153(1):179-219.

PMID: 10471707 [PubMed - indexed for MEDLINE]

9:

Conservation of alternative splicing and genomic organization of the myosin alkali light-chain (Mlc1) gene among Drosophila species.

Leicht BG, Lyckegaard EM, Benedict CM, Clark AG.

Mol Biol Evol. 1993 Jul;10(4):769-90.

PMID: 8355600 [PubMed - indexed for MEDLINE]

10:

Comparative sequence analysis of a gene-dense region among closely related species of Drosophila melanogaster.

Kawahara Y, Matsuo T, Nozawa M, Shin-I T, Kohara Y, Aigaki T.

Genes Genet Syst. 2004 Dec;79(6):351-9.

PMID: 15729003 [PubMed - indexed for MEDLINE]

11:

Computational identification of Drosophila microRNA genes.

Lai EC, Tomancak P, Williams RW, Rubin GM.

Genome Biol. 2003;4(7):R42. Epub 2003 Jun 30.

PMID: 12844358 [PubMed - indexed for MEDLINE]

12:

Cross-species comparison significantly improves genome-wide prediction of cis-regulatory modules in Drosophila.

Sinha S, Schroeder MD, Unnerstall U, Gaul U, Siggia ED.

BMC Bioinformatics. 2004 Sep 9;5:129.

PMID: 15357878 [PubMed - indexed for MEDLINE]

13:

Conservation patterns in different functional sequence categories of divergent Drosophila species.

Papatsenko D, Kislyuk A, Levine M, Dubchak I.

Genomics. 2006 Oct;88(4):431-42. Epub 2006 May 11.

PMID: 16697139 [PubMed - indexed for MEDLINE]

14:

Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

Misra S, Crosby MA, Mungall CJ, Matthews BB, Campbell KS, Hradecky P, Huang Y, Kaminker JS, Millburn GH, Prochnik SE, Smith CD, Tupy JL, Whitfied EJ, Bayraktaroglu L, Berman BP, Bettencourt BR, Celniker SE, de Grey AD, Drysdale RA, Harris NL, Richter J, Russo S, Schroeder AJ, Shu SQ, Stapleton M, Yamada C, Ashburner M, Gelbart WM, Rubin GM, Lewis SE.

Genome Biol. 2002;3(12):RESEARCH0083. Epub 2002 Dec 31. Review.

PMID: 12537572 [PubMed - indexed for MEDLINE]

15:

Interspecific comparison of a Drosophila gene encoding FMRFamide-related neuropeptides.

Taghert PH, Schneider LE.

J Neurosci. 1990 Jun;10(6):1929-42.

PMID: 2113087 [PubMed - indexed for MEDLINE]

16:

The Release 5.1 annotation of Drosophila melanogaster heterochromatin.

Smith CD, Shu S, Mungall CJ, Karpen GH.

Science. 2007 Jun 15;316(5831):1586-91. Erratum in: Science. 2007 Sep 7;317(5843):1325.

PMID: 17569856 [PubMed - indexed for MEDLINE]

17:

Genomic characterization of a repetitive motif strongly associated with developmental genes in Drosophila.

Costas J, Vieira CP, Casares F, Vieira J.

BMC Genomics. 2003 Dec 16;4(1):52.

PMID: 14675495 [PubMed - indexed for MEDLINE]

18:

Naturally occurring variation in copia expression is due to both element (cis) and host (trans) regulatory variation.

Matyunina LV, Jordan IK, McDonald JF.

Proc Natl Acad Sci U S A. 1996 Jul 9;93(14):7097-102.

PMID: 8692951 [PubMed - indexed for MEDLINE]

19:

The urate oxidase gene of Drosophila pseudoobscura and Drosophila melanogaster: evolutionary changes of sequence and regulation.

Friedman TB, Burnett JB, Lootens S, Steinman R, Wallrath LL.

J Mol Evol. 1992 Jan;34(1):62-77.

PMID: 1556745 [PubMed - indexed for MEDLINE]

20:

Conservation and change in structural and 5' flanking sequences of esterase 6 in sibling Drosophila species.

Karotam J, Delves AC, Oakeshott JG.

Genetica. 1993;88(1):11-28. Erratum in: Genetica. 1993;90(1):79-80.

PMID: 8375665 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 504
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