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Items 1 - 20 of 163
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1:

ProSplicer: a database of putative alternative splicing information derived from protein, mRNA and expressed sequence tag sequence data.

Huang HD, Horng JT, Lee CC, Liu BJ.

Genome Biol. 2003;4(4):R29. Epub 2003 Mar 14.

PMID: 12702210 [PubMed - indexed for MEDLINE]

2:

The Alternative Splicing Gallery (ASG): bridging the gap between genome and transcriptome.

Leipzig J, Pevzner P, Heber S.

Nucleic Acids Res. 2004 Aug 3;32(13):3977-83. Print 2004.

PMID: 15292448 [PubMed - indexed for MEDLINE]

3:

Integrating alternative splicing detection into gene prediction.

Foissac S, Schiex T.

BMC Bioinformatics. 2005 Feb 10;6:25.

PMID: 15705189 [PubMed - indexed for MEDLINE]

4:

PALS db: Putative Alternative Splicing database.

Huang YH, Chen YT, Lai JJ, Yang ST, Yang UC.

Nucleic Acids Res. 2002 Jan 1;30(1):186-90.

PMID: 11752289 [PubMed - indexed for MEDLINE]

5:

Identification of alternatively spliced mRNA variants related to cancers by genome-wide ESTs alignment.

Hui L, Zhang X, Wu X, Lin Z, Wang Q, Li Y, Hu G.

Oncogene. 2004 Apr 15;23(17):3013-23.

PMID: 15048092 [PubMed - indexed for MEDLINE]

6:

ASmodeler: gene modeling of alternative splicing from genomic alignment of mRNA, EST and protein sequences.

Kim N, Shin S, Lee S.

Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W181-6.

PMID: 15215376 [PubMed - indexed for MEDLINE]

7:

HOLLYWOOD: a comparative relational database of alternative splicing.

Holste D, Huo G, Tung V, Burge CB.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D56-62.

PMID: 16381932 [PubMed - indexed for MEDLINE]

8:

Selecting for functional alternative splices in ESTs.

Kan Z, States D, Gish W.

Genome Res. 2002 Dec;12(12):1837-45.

PMID: 12466287 [PubMed - indexed for MEDLINE]

9:

MAASE: an alternative splicing database designed for supporting splicing microarray applications.

Zheng CL, Kwon YS, Li HR, Zhang K, Coutinho-Mansfield G, Yang C, Nair TM, Gribskov M, Fu XD.

RNA. 2005 Dec;11(12):1767-76. Epub 2005 Oct 26.

PMID: 16251387 [PubMed - indexed for MEDLINE]

10:

SYSTERS, GeneNest, SpliceNest: exploring sequence space from genome to protein.

Krause A, Haas SA, Coward E, Vingron M.

Nucleic Acids Res. 2002 Jan 1;30(1):299-300.

PMID: 11752319 [PubMed - indexed for MEDLINE]

11:

ASPicDB: a database resource for alternative splicing analysis.

Castrignanò T, D'Antonio M, Anselmo A, Carrabino D, D'Onorio De Meo A, D'Erchia AM, Licciulli F, Mangiulli M, Mignone F, Pavesi G, Picardi E, Riva A, Rizzi R, Bonizzoni P, Pesole G.

Bioinformatics. 2008 May 15;24(10):1300-4. Epub 2008 Apr 3.

PMID: 18388144 [PubMed - indexed for MEDLINE]

12:

ASAP: the Alternative Splicing Annotation Project.

Lee C, Atanelov L, Modrek B, Xing Y.

Nucleic Acids Res. 2003 Jan 1;31(1):101-5.

PMID: 12519958 [PubMed - indexed for MEDLINE]

13:

Genome-wide detection of alternative splicing in expressed sequences of human genes.

Modrek B, Resch A, Grasso C, Lee C.

Nucleic Acids Res. 2001 Jul 1;29(13):2850-9.

PMID: 11433032 [PubMed - indexed for MEDLINE]

14:

EASED: Extended Alternatively Spliced EST Database.

Pospisil H, Herrmann A, Bortfeldt RH, Reich JG.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D70-4.

PMID: 14681361 [PubMed - indexed for MEDLINE]

15:

Gene structure prediction and alternative splicing analysis using genomically aligned ESTs.

Kan Z, Rouchka EC, Gish WR, States DJ.

Genome Res. 2001 May;11(5):889-900.

PMID: 11337482 [PubMed - indexed for MEDLINE]

16:

ECgene: an alternative splicing database update.

Lee Y, Lee Y, Kim B, Shin Y, Nam S, Kim P, Kim N, Chung WH, Kim J, Lee S.

Nucleic Acids Res. 2007 Jan;35(Database issue):D99-103. Epub 2006 Nov 28.

PMID: 17132829 [PubMed - indexed for MEDLINE]

17:

A comparison of expressed sequence tags (ESTs) to human genomic sequences.

Wolfsberg TG, Landsman D.

Nucleic Acids Res. 1997 Apr 15;25(8):1626-32.

PMID: 9092672 [PubMed - indexed for MEDLINE]

18:

EuSplice: a unified resource for the analysis of splice signals and alternative splicing in eukaryotic genes.

Bhasi A, Pandey RV, Utharasamy SP, Senapathy P.

Bioinformatics. 2007 Jul 15;23(14):1815-23. Epub 2007 Mar 7.

PMID: 17344236 [PubMed - indexed for MEDLINE]

19:

Genome-wide detection of tissue-specific alternative splicing in the human transcriptome.

Xu Q, Modrek B, Lee C.

Nucleic Acids Res. 2002 Sep 1;30(17):3754-66.

PMID: 12202761 [PubMed - indexed for MEDLINE]

20:

Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration.

Teber ET, Crawford E, Bolton KB, Van Dyk D, Schofield PR, Kapoor V, Church WB.

BMC Bioinformatics. 2006 Jan 23;7:33.

PMID: 16426464 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 163
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