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Items 1 - 20 of 144
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1:

The two faces of Alba: the evolutionary connection between proteins participating in chromatin structure and RNA metabolism.

Aravind L, Iyer LM, Anantharaman V.

Genome Biol. 2003;4(10):R64. Epub 2003 Sep 8.

PMID: 14519199 [PubMed - indexed for MEDLINE]

2:

Novel conserved domains in proteins with predicted roles in eukaryotic cell-cycle regulation, decapping and RNA stability.

Anantharaman V, Aravind L.

BMC Genomics. 2004 Jul 16;5(1):45.

PMID: 15257761 [PubMed - indexed for MEDLINE]

3:

Archaeal chromatin proteins: different structures but common function?

Sandman K, Reeve JN.

Curr Opin Microbiol. 2005 Dec;8(6):656-61. Epub 2005 Oct 26. Review.

PMID: 16256418 [PubMed - indexed for MEDLINE]

4:

Regulatory potential, phyletic distribution and evolution of ancient, intracellular small-molecule-binding domains.

Anantharaman V, Koonin EV, Aravind L.

J Mol Biol. 2001 Apr 13;307(5):1271-92.

PMID: 11292341 [PubMed - indexed for MEDLINE]

5:

Is Alba an RNase P subunit?

Ellis JC, Barnes J, Brown JW.

RNA Biol. 2007 Nov;4(3):169-72.

PMID: 18347433 [PubMed - indexed for MEDLINE]

6:

Genus-specific protein binding to the large clusters of DNA repeats (short regularly spaced repeats) present in Sulfolobus genomes.

Peng X, Brügger K, Shen B, Chen L, She Q, Garrett RA.

J Bacteriol. 2003 Apr;185(8):2410-7.

PMID: 12670964 [PubMed - indexed for MEDLINE]

7:

Comparative genomics of the FtsK-HerA superfamily of pumping ATPases: implications for the origins of chromosome segregation, cell division and viral capsid packaging.

Iyer LM, Makarova KS, Koonin EV, Aravind L.

Nucleic Acids Res. 2004 Oct 5;32(17):5260-79. Print 2004.

PMID: 15466593 [PubMed - indexed for MEDLINE]

8:

Crystal structure and functional analysis of an archaeal chromatin protein Alba from the hyperthermophilic archaeon Pyrococcus horikoshii OT3.

Hada K, Nakashima T, Osawa T, Shimada H, Kakuta Y, Kimura M.

Biosci Biotechnol Biochem. 2008 Mar;72(3):749-58. Epub 2008 Mar 7.

PMID: 18323660 [PubMed - indexed for MEDLINE]

9:

Heterodimerization regulates RNase MRP/RNase P association, localization, and expression of Rpp20 and Rpp25.

Welting TJ, Peters FM, Hensen SM, van Doorn NL, Kikkert BJ, Raats JM, van Venrooij WJ, Pruijn GJ.

RNA. 2007 Jan;13(1):65-75. Epub 2006 Nov 21.

PMID: 17119099 [PubMed - indexed for MEDLINE]

10:

Structure of Alba: an archaeal chromatin protein modulated by acetylation.

Wardleworth BN, Russell RJ, Bell SD, Taylor GL, White MF.

EMBO J. 2002 Sep 2;21(17):4654-62.

PMID: 12198167 [PubMed - indexed for MEDLINE]

11:

Diversity, taxonomy and evolution of medium-chain dehydrogenase/reductase superfamily.

Riveros-Rosas H, Julián-Sánchez A, Villalobos-Molina R, Pardo JP, Piña E.

Eur J Biochem. 2003 Aug;270(16):3309-34.

PMID: 12899689 [PubMed - indexed for MEDLINE]

12:

Crystal structure of archaeal ribonuclease P protein Ph1771p from Pyrococcus horikoshii OT3: an archaeal homolog of eukaryotic ribonuclease P protein Rpp29.

Numata T, Ishimatsu I, Kakuta Y, Tanaka I, Kimura M.

RNA. 2004 Sep;10(9):1423-32.

PMID: 15317976 [PubMed - indexed for MEDLINE]

13:

Structural and evolutionary bioinformatics of the SPOUT superfamily of methyltransferases.

Tkaczuk KL, Dunin-Horkawicz S, Purta E, Bujnicki JM.

BMC Bioinformatics. 2007 Mar 5;8:73.

PMID: 17338813 [PubMed - indexed for MEDLINE]

14:

Influence of chromatin and single strand binding proteins on the activity of an archaeal MCM.

Marsh VL, McGeoch AT, Bell SD.

J Mol Biol. 2006 Apr 14;357(5):1345-50. Epub 2006 Feb 6.

PMID: 16490210 [PubMed - indexed for MEDLINE]

16:

RNase P: interface of the RNA and protein worlds.

Evans D, Marquez SM, Pace NR.

Trends Biochem Sci. 2006 Jun;31(6):333-41. Epub 2006 May 6. Review.

PMID: 16679018 [PubMed - indexed for MEDLINE]

17:

Discovery of the principal specific transcription factors of Apicomplexa and their implication for the evolution of the AP2-integrase DNA binding domains.

Balaji S, Babu MM, Iyer LM, Aravind L.

Nucleic Acids Res. 2005 Jul 21;33(13):3994-4006. Print 2005.

PMID: 16040597 [PubMed - indexed for MEDLINE]

18:

Evolutionary genomics of the HAD superfamily: understanding the structural adaptations and catalytic diversity in a superfamily of phosphoesterases and allied enzymes.

Burroughs AM, Allen KN, Dunaway-Mariano D, Aravind L.

J Mol Biol. 2006 Sep 1;361(5):1003-34. Epub 2006 Jul 7.

PMID: 16889794 [PubMed - indexed for MEDLINE]

19:

The interaction of Alba, a conserved archaeal chromatin protein, with Sir2 and its regulation by acetylation.

Bell SD, Botting CH, Wardleworth BN, Jackson SP, White MF.

Science. 2002 Apr 5;296(5565):148-51.

PMID: 11935028 [PubMed - indexed for MEDLINE]

20:

Detection of novel members, structure-function analysis and evolutionary classification of the 2H phosphoesterase superfamily.

Mazumder R, Iyer LM, Vasudevan S, Aravind L.

Nucleic Acids Res. 2002 Dec 1;30(23):5229-43.

PMID: 12466548 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 144
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