POCUS: mining genomic sequence annotation to predict disease genes.

Turner FS, Clutterbuck DR, Semple CA.

Genome Biol. 2003;4(11):R75. Epub 2003 Oct 10.

PMID: 14611661 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Speeding disease gene discovery by sequence based candidate prioritization.

Adie EA, Adams RR, Evans KL, Porteous DJ, Pickard BS.

BMC Bioinformatics. 2005 Mar 14;6:55.

PMID: 15766383 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Bioinformatic analysis of autism positional candidate genes using biological databases and computational gene network prediction.

Yonan AL, Palmer AA, Smith KC, Feldman I, Lee HK, Yonan JM, Fischer SG, Pavlidis P, Gilliam TC.

Genes Brain Behav. 2003 Oct;2(5):303-20.

PMID: 14606695 [PubMed - indexed for MEDLINE]

Related Articles

Analysis of the neuroligin 3 and 4 genes in autism and other neuropsychiatric patients.

Yan J, Oliveira G, Coutinho A, Yang C, Feng J, Katz C, Sram J, Bockholt A, Jones IR, Craddock N, Cook EH Jr, Vicente A, Sommer SS.

Mol Psychiatry. 2005 Apr;10(4):329-32. No abstract available.

PMID: 15622415 [PubMed - indexed for MEDLINE]

Related Articles

Computational disease gene identification: a concert of methods prioritizes type 2 diabetes and obesity candidate genes.

Tiffin N, Adie E, Turner F, Brunner HG, van Driel MA, Oti M, Lopez-Bigas N, Ouzounis C, Perez-Iratxeta C, Andrade-Navarro MA, Adeyemo A, Patti ME, Semple CA, Hide W.

Nucleic Acids Res. 2006 Jun 6;34(10):3067-81. Print 2006.

PMID: 16757574 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Analysis of protein sequence and interaction data for candidate disease gene prediction.

George RA, Liu JY, Feng LL, Bryson-Richardson RJ, Fatkin D, Wouters MA.

Nucleic Acids Res. 2006;34(19):e130. Epub 2006 Oct 4.

PMID: 17020920 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

SUSPECTS: enabling fast and effective prioritization of positional candidates.

Adie EA, Adams RR, Evans KL, Porteous DJ, Pickard BS.

Bioinformatics. 2006 Mar 15;22(6):773-4. Epub 2006 Jan 19.

PMID: 16423925 [PubMed - indexed for MEDLINE]

Related Articles

[Neurodevelopmental disturbance in the pathogenesis of major mental disorders]

Kamiya A, Kitabatake Y, Sawa A.

Brain Nerve. 2008 Apr;60(4):445-52. Review. Japanese.

PMID: 18421986 [PubMed - indexed for MEDLINE]

Related Articles

Gene prioritization through genomic data fusion.

Aerts S, Lambrechts D, Maity S, Van Loo P, Coessens B, De Smet F, Tranchevent LC, De Moor B, Marynen P, Hassan B, Carmeliet P, Moreau Y.

Nat Biotechnol. 2006 May;24(5):537-44. Erratum in: Nat Biotechnol. 2006 Jun;24(6):719.

PMID: 16680138 [PubMed - indexed for MEDLINE]

Related Articles

Integration of text- and data-mining using ontologies successfully selects disease gene candidates.

Tiffin N, Kelso JF, Powell AR, Pan H, Bajic VB, Hide WA.

Nucleic Acids Res. 2005 Mar 14;33(5):1544-52. Print 2005.

PMID: 15767279 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Walking the interactome for prioritization of candidate disease genes.

Köhler S, Bauer S, Horn D, Robinson PN.

Am J Hum Genet. 2008 Apr;82(4):949-58. Epub 2008 Mar 27.

PMID: 18371930 [PubMed - indexed for MEDLINE]

Related Articles

Prioritization of candidate disease genes for metabolic syndrome by computational analysis of its defining phenotypes.

Tiffin N, Okpechi I, Perez-Iratxeta C, Andrade-Navarro MA, Ramesar R.

Physiol Genomics. 2008 Sep 17;35(1):55-64. Epub 2008 Jul 8.

PMID: 18612082 [PubMed - indexed for MEDLINE]

Related Articles

Functional annotation and identification of candidate disease genes by computational analysis of normal tissue gene expression data.

Miozzi L, Piro RM, Rosa F, Ala U, Silengo L, Di Cunto F, Provero P.

PLoS ONE. 2008 Jun 18;3(6):e2439.

PMID: 18560577 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

[Genetics and epigenetics in autism]

Nakayama A, Masaki S, Aoki E.

Nihon Shinkei Seishin Yakurigaku Zasshi. 2006 Nov;26(5-6):209-12. Review. Japanese.

PMID: 17240846 [PubMed - indexed for MEDLINE]

Related Articles

Predicting disease genes using protein-protein interactions.

Oti M, Snel B, Huynen MA, Brunner HG.

J Med Genet. 2006 Aug;43(8):691-8. Epub 2006 Apr 12.

PMID: 16611749 [PubMed - indexed for MEDLINE]

Related Articles

Commonality of functional annotation: a method for prioritization of candidate genes from genome-wide linkage studies.

Shriner D, Baye TM, Padilla MA, Zhang S, Vaughan LK, Loraine AE.

Nucleic Acids Res. 2008 Mar;36(4):e26. Epub 2008 Feb 7.

PMID: 18263617 [PubMed - indexed for MEDLINE]

Related Articles Free article in PMC

Do known mutations in neuroligin genes (NLGN3 and NLGN4) cause autism?

Talebizadeh Z, Bittel DC, Veatch OJ, Butler MG, Takahashi TN, Miles JH.

J Autism Dev Disord. 2004 Dec;34(6):735-6. No abstract available.

PMID: 15679194 [PubMed - indexed for MEDLINE]

Related Articles

Disorder-associated mutations lead to functional inactivation of neuroligins.

Chih B, Afridi SK, Clark L, Scheiffele P.

Hum Mol Genet. 2004 Jul 15;13(14):1471-7. Epub 2004 May 18.

PMID: 15150161 [PubMed - indexed for MEDLINE]

Related Articles

Computational analysis of human disease-associated genes and their protein products.

Sreekumar KR, Aravind L, Koonin EV.

Curr Opin Genet Dev. 2001 Jun;11(3):247-57. Review.

PMID: 11377959 [PubMed - indexed for MEDLINE]

Related Articles

Prioritizing regions of candidate genes for efficient mutation screening.

Braun TA, Shankar SP, Davis S, O'Leary B, Scheetz TE, Clark AF, Sheffield VC, Casavant TL, Stone EM.

Hum Mutat. 2006 Feb;27(2):195-200.

PMID: 16395665 [PubMed - indexed for MEDLINE]

Related Articles