Genome-wide investigation of light and carbon signaling interactions in Arabidopsis.

Thum KE, Shin MJ, Palenchar PM, Kouranov A, Coruzzi GM.

Genome Biol. 2004;5(2):R10. Epub 2004 Jan 27.

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Genome-wide patterns of carbon and nitrogen regulation of gene expression validate the combined carbon and nitrogen (CN)-signaling hypothesis in plants.

Palenchar PM, Kouranov A, Lejay LV, Coruzzi GM.

Genome Biol. 2004;5(11):R91. Epub 2004 Oct 29.

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An integrated genetic, genomic and systems approach defines gene networks regulated by the interaction of light and carbon signaling pathways in Arabidopsis.

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Müller R, Morant M, Jarmer H, Nilsson L, Nielsen TH.

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Immediate-early and delayed cytokinin response genes of Arabidopsis thaliana identified by genome-wide expression profiling reveal novel cytokinin-sensitive processes and suggest cytokinin action through transcriptional cascades.

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Vanderauwera S, Zimmermann P, Rombauts S, Vandenabeele S, Langebartels C, Gruissem W, Inzé D, Van Breusegem F.

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Qualitative network models and genome-wide expression data define carbon/nitrogen-responsive molecular machines in Arabidopsis.

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A universal algorithm for genome-wide in silicio identification of biologically significant gene promoter putative cis-regulatory-elements; identification of new elements for reactive oxygen species and sucrose signaling in Arabidopsis.

Geisler M, Kleczkowski LA, Karpinski S.

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Conservation and divergence of light-regulated genome expression patterns during seedling development in rice and Arabidopsis.

Jiao Y, Ma L, Strickland E, Deng XW.

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phyA dominates in transduction of red-light signals to rapidly responding genes at the initiation of Arabidopsis seedling de-etiolation.

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