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Items 1 - 20 of 170
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1:

Maize DNA-sequencing strategies and genome organization.

Okagaki RJ, Phillips RL.

Genome Biol. 2004;5(5):223. Epub 2004 Apr 16. Review.

PMID: 15128439 [PubMed - indexed for MEDLINE]

2:

Maize genome sequencing by methylation filtration.

Palmer LE, Rabinowicz PD, O'Shaughnessy AL, Balija VS, Nascimento LU, Dike S, de la Bastide M, Martienssen RA, McCombie WR.

Science. 2003 Dec 19;302(5653):2115-7.

PMID: 14684820 [PubMed - indexed for MEDLINE]

3:

Reduced representation sequencing: a success in maize and a promise for other plant genomes.

Barbazuk WB, Bedell JA, Rabinowicz PD.

Bioessays. 2005 Aug;27(8):839-48.

PMID: 16015589 [PubMed - indexed for MEDLINE]

4:

Enrichment of gene-coding sequences in maize by genome filtration.

Whitelaw CA, Barbazuk WB, Pertea G, Chan AP, Cheung F, Lee Y, Zheng L, van Heeringen S, Karamycheva S, Bennetzen JL, SanMiguel P, Lakey N, Bedell J, Yuan Y, Budiman MA, Resnick A, Van Aken S, Utterback T, Riedmuller S, Williams M, Feldblyum T, Schubert K, Beachy R, Fraser CM, Quackenbush J.

Science. 2003 Dec 19;302(5653):2118-20.

PMID: 14684821 [PubMed - indexed for MEDLINE]

5:

The maize genome as a model for efficient sequence analysis of large plant genomes.

Rabinowicz PD, Bennetzen JL.

Curr Opin Plant Biol. 2006 Apr;9(2):149-56. Epub 2006 Feb 3. Review.

PMID: 16459129 [PubMed - indexed for MEDLINE]

6:

Utility of different gene enrichment approaches toward identifying and sequencing the maize gene space.

Springer NM, Xu X, Barbazuk WB.

Plant Physiol. 2004 Oct;136(2):3023-33. Epub 2004 Aug 6.

PMID: 15299128 [PubMed - indexed for MEDLINE]

7:

Organization and variability of the maize genome.

Messing J, Dooner HK.

Curr Opin Plant Biol. 2006 Apr;9(2):157-63. Epub 2006 Feb 3. Review.

PMID: 16459130 [PubMed - indexed for MEDLINE]

8:

High-Cot sequence analysis of the maize genome.

Yuan Y, SanMiguel PJ, Bennetzen JL.

Plant J. 2003 Apr;34(2):249-55. Erratum in: Plant J. 2003 Nov;36(3):430.

PMID: 12694599 [PubMed - indexed for MEDLINE]

9:

Differential methylation of genes and retrotransposons facilitates shotgun sequencing of the maize genome.

Rabinowicz PD, Schutz K, Dedhia N, Yordan C, Parnell LD, Stein L, McCombie WR, Martienssen RA.

Nat Genet. 1999 Nov;23(3):305-8.

PMID: 10545948 [PubMed - indexed for MEDLINE]

10:

Nested retrotransposons in the intergenic regions of the maize genome.

SanMiguel P, Tikhonov A, Jin YK, Motchoulskaia N, Zakharov D, Melake-Berhan A, Springer PS, Edwards KJ, Lee M, Avramova Z, Bennetzen JL.

Science. 1996 Nov 1;274(5288):765-8.

PMID: 8864112 [PubMed - indexed for MEDLINE]

11:

A strategy for assembling the maize (Zea mays L.) genome.

Emrich SJ, Aluru S, Fu Y, Wen TJ, Narayanan M, Guo L, Ashlock DA, Schnable PS.

Bioinformatics. 2004 Jan 22;20(2):140-7.

PMID: 14734303 [PubMed - indexed for MEDLINE]

12:

Types and frequencies of sequencing errors in methyl-filtered and high c0t maize genome survey sequences.

Fu Y, Hsia AP, Guo L, Schnable PS.

Plant Physiol. 2004 Aug;135(4):2040-5. Epub 2004 Aug 6.

PMID: 15299135 [PubMed - indexed for MEDLINE]

13:

Comparative genomics of Arabidopsis and maize: prospects and limitations.

Brendel V, Kurtz S, Walbot V.

Genome Biol. 2002;3(3):REVIEWS1005. Epub 2002 Feb 14. Review.

PMID: 11897028 [PubMed - indexed for MEDLINE]

14:

Sequence composition and genome organization of maize.

Messing J, Bharti AK, Karlowski WM, Gundlach H, Kim HR, Yu Y, Wei F, Fuks G, Soderlund CA, Mayer KF, Wing RA.

Proc Natl Acad Sci U S A. 2004 Oct 5;101(40):14349-54. Epub 2004 Sep 23.

PMID: 15388850 [PubMed - indexed for MEDLINE]

15:

Integration of Cot analysis, DNA cloning, and high-throughput sequencing facilitates genome characterization and gene discovery.

Peterson DG, Schulze SR, Sciara EB, Lee SA, Bowers JE, Nagel A, Jiang N, Tibbitts DC, Wessler SR, Paterson AH.

Genome Res. 2002 May;12(5):795-807.

PMID: 11997346 [PubMed - indexed for MEDLINE]

16:

Computational prediction and molecular confirmation of Helitron transposons in the maize genome.

Du C, Caronna J, He L, Dooner HK.

BMC Genomics. 2008 Jan 28;9:51.

PMID: 18226261 [PubMed - indexed for MEDLINE]

17:

A BAC pooling strategy combined with PCR-based screenings in a large, highly repetitive genome enables integration of the maize genetic and physical maps.

Yim YS, Moak P, Sanchez-Villeda H, Musket TA, Close P, Klein PE, Mullet JE, McMullen MD, Fang Z, Schaeffer ML, Gardiner JM, Coe EH Jr, Davis GL.

BMC Genomics. 2007 Feb 9;8:47.

PMID: 17291341 [PubMed - indexed for MEDLINE]

18:

RescueMu protocols for maize functional genomics.

Raizada MN.

Methods Mol Biol. 2003;236:37-58.

PMID: 14501057 [PubMed - indexed for MEDLINE]

19:

The TIGR Maize Database.

Chan AP, Pertea G, Cheung F, Lee D, Zheng L, Whitelaw C, Pontaroli AC, SanMiguel P, Yuan Y, Bennetzen J, Barbazuk WB, Quackenbush J, Rabinowicz PD.

Nucleic Acids Res. 2006 Jan 1;34(Database issue):D771-6.

PMID: 16381977 [PubMed - indexed for MEDLINE]

20:

Gene enrichment in maize with hypomethylated partial restriction (HMPR) libraries.

Emberton J, Ma J, Yuan Y, SanMiguel P, Bennetzen JL.

Genome Res. 2005 Oct;15(10):1441-6.

PMID: 16204197 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 170
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