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Items 1 - 20 of 148
of 8Next
1:

ELXR: a resource for rapid exon-directed sequence analysis.

Schageman JJ, Horton CJ, Niu S, Garner HR, Pertsemlidis A.

Genome Biol. 2004;5(5):R36. Epub 2004 Apr 28.

PMID: 15128450 [PubMed - indexed for MEDLINE]

2:

EasyExonPrimer: automated primer design for exon sequences.

Wu X, Munroe DJ.

Appl Bioinformatics. 2006;5(2):119-20.

PMID: 16722777 [PubMed - indexed for MEDLINE]

3:

BatchPrimer3: a high throughput web application for PCR and sequencing primer design.

You FM, Huo N, Gu YQ, Luo MC, Ma Y, Hane D, Lazo GR, Dvorak J, Anderson OD.

BMC Bioinformatics. 2008 May 29;9:253.

PMID: 18510760 [PubMed - indexed for MEDLINE]

4:

methBLAST and methPrimerDB: web-tools for PCR based methylation analysis.

Pattyn F, Hoebeeck J, Robbrecht P, Michels E, De Paepe A, Bottu G, Coornaert D, Herzog R, Speleman F, Vandesompele J.

BMC Bioinformatics. 2006 Nov 9;7:496.

PMID: 17094804 [PubMed - indexed for MEDLINE]

5:

Novel computational methods for increasing PCR primer design effectiveness in directed sequencing.

Li K, Brownley A, Stockwell TB, Beeson K, McIntosh TC, Busam D, Ferriera S, Murphy S, Levy S.

BMC Bioinformatics. 2008 Apr 11;9:191.

PMID: 18405373 [PubMed - indexed for MEDLINE]

6:

SOP3: a web-based tool for selection of oligonucleotide primers for single nucleotide polymorphism analysis by Pyrosequencing.

Alexander AM, Pecoraro C, Styche A, Rudert WA, Benos PV, Ringquist S, Trucco M.

Biotechniques. 2005 Jan;38(1):87-94.

PMID: 15679090 [PubMed - indexed for MEDLINE]

7:

PathoGene: a pathogen coding sequence discovery and analysis resource.

Ng KW, Lawson J, Garner HR.

Biotechniques. 2004 Aug;37(2):218, 220-2.

PMID: 15335212 [PubMed - indexed for MEDLINE]

8:

Web-based primer design software for genome-scale genotyping by pyrosequencing.

Ringquist S, Pecoraro C, Lu Y, Styche A, Rudert WA, Benos PV, Trucco M.

Methods Mol Biol. 2007;373:25-38.

PMID: 17185755 [PubMed - indexed for MEDLINE]

9:

SNPbox: a modular software package for large-scale primer design.

Weckx S, De Rijk P, Van Broeckhoven C, Del-Favero J.

Bioinformatics. 2005 Feb 1;21(3):385-7. Epub 2004 Sep 3.

PMID: 15347573 [PubMed - indexed for MEDLINE]

10:

The PCR suite.

van Baren MJ, Heutink P.

Bioinformatics. 2004 Mar 1;20(4):591-3. Epub 2004 Jan 29.

PMID: 14751986 [PubMed - indexed for MEDLINE]

11:

Graphical design of primers with PerlPrimer.

Marshall O.

Methods Mol Biol. 2007;402:403-14. Review.

PMID: 17951808 [PubMed - indexed for MEDLINE]

12:

PrimerZ: streamlined primer design for promoters, exons and human SNPs.

Tsai MF, Lin YJ, Cheng YC, Lee KH, Huang CC, Chen YT, Yao A.

Nucleic Acids Res. 2007 Jul;35(Web Server issue):W63-5. Epub 2007 May 30.

PMID: 17537812 [PubMed - indexed for MEDLINE]

13:

Bioinformatic analysis of exon repetition, exon scrambling and trans-splicing in humans.

Shao X, Shepelev V, Fedorov A.

Bioinformatics. 2006 Mar 15;22(6):692-8. Epub 2005 Nov 24.

PMID: 16308355 [PubMed - indexed for MEDLINE]

14:

MPrime: efficient large scale multiple primer and oligonucleotide design for customized gene microarrays.

Rouchka EC, Khalyfa A, Cooper NG.

BMC Bioinformatics. 2005 Jul 13;6:175.

PMID: 16014168 [PubMed - indexed for MEDLINE]

15:

AcePrimer: automation of PCR primer design based on gene structure.

McKay SJ, Jones SJ.

Bioinformatics. 2002 Nov;18(11):1538-9.

PMID: 12424127 [PubMed - indexed for MEDLINE]

16:

MultiPrimer: software for multiplex primer design.

Lee C, Wu JS, Shiue YL, Liang HL.

Appl Bioinformatics. 2006;5(2):99-109.

PMID: 16722774 [PubMed - indexed for MEDLINE]

17:

Accurate identification of novel human genes through simultaneous gene prediction in human, mouse, and rat.

Dewey C, Wu JQ, Cawley S, Alexandersson M, Gibbs R, Pachter L.

Genome Res. 2004 Apr;14(4):661-4.

PMID: 15060007 [PubMed - indexed for MEDLINE]

18:

Dual-genome primer design for construction of DNA microarrays.

Andersson A, Bernander R, Nilsson P.

Bioinformatics. 2005 Feb 1;21(3):325-32. Epub 2004 Aug 27.

PMID: 15333463 [PubMed - indexed for MEDLINE]

19:

Efficient high-throughput resequencing of genomic DNA.

Miller RD, Duan S, Lovins EG, Kloss EF, Kwok PY.

Genome Res. 2003 Apr;13(4):717-20. Epub 2003 Mar 12.

PMID: 12654721 [PubMed - indexed for MEDLINE]

20:

ExPrimer: to design primers from exon--exon junctions.

Sandhu KS, Acharya KK.

Bioinformatics. 2005 May 1;21(9):2091-2. Epub 2005 Feb 4.

PMID: 15699028 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 148
of 8Next