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Items 1 - 20 of 156
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1:

System-based proteomic analysis of the interferon response in human liver cells.

Yan W, Lee H, Yi EC, Reiss D, Shannon P, Kwieciszewski BK, Coito C, Li XJ, Keller A, Eng J, Galitski T, Goodlett DR, Aebersold R, Katze MG.

Genome Biol. 2004;5(8):R54. Epub 2004 Jul 22.

PMID: 15287976 [PubMed - indexed for MEDLINE]

2:

Gene expression profiling of the cellular transcriptional network regulated by alpha/beta interferon and its partial attenuation by the hepatitis C virus nonstructural 5A protein.

Geiss GK, Carter VS, He Y, Kwieciszewski BK, Holzman T, Korth MJ, Lazaro CA, Fausto N, Bumgarner RE, Katze MG.

J Virol. 2003 Jun;77(11):6367-75.

PMID: 12743294 [PubMed - indexed for MEDLINE]

3:

A dataset of human liver proteins identified by protein profiling via isotope-coded affinity tag (ICAT) and tandem mass spectrometry.

Yan W, Lee H, Deutsch EW, Lazaro CA, Tang W, Chen E, Fausto N, Katze MG, Aebersold R.

Mol Cell Proteomics. 2004 Oct;3(10):1039-41. Epub 2004 Jul 21.

PMID: 15269248 [PubMed - indexed for MEDLINE]

4:

Distinct poly(I-C) and virus-activated signaling pathways leading to interferon-beta production in hepatocytes.

Li K, Chen Z, Kato N, Gale M Jr, Lemon SM.

J Biol Chem. 2005 Apr 29;280(17):16739-47. Epub 2005 Feb 28.

PMID: 15737993 [PubMed - indexed for MEDLINE]

5:

The application of new software tools to quantitative protein profiling via isotope-coded affinity tag (ICAT) and tandem mass spectrometry: II. Evaluation of tandem mass spectrometry methodologies for large-scale protein analysis, and the application of statistical tools for data analysis and interpretation.

von Haller PD, Yi E, Donohoe S, Vaughn K, Keller A, Nesvizhskii AI, Eng J, Li XJ, Goodlett DR, Aebersold R, Watts JD.

Mol Cell Proteomics. 2003 Jul;2(7):428-42. Epub 2003 Jun 25.

PMID: 12832459 [PubMed - indexed for MEDLINE]

7:

Proteome analysis identifies the role of heat stress in production of progeny HCV in Huh7 cells harboring intact HCV.

Zhao S, Xun M, Chu Y, Zhu T, Wang Y, Yan L, Xun X, Xu K, Song J, Shao M.

Intervirology. 2008;51(3):196-202. Epub 2008 Aug 28.

PMID: 18753793 [PubMed - indexed for MEDLINE]

8:

Hepatitis C virus triggers apoptosis of a newly developed hepatoma cell line through antiviral defense system.

Zhu H, Dong H, Eksioglu E, Hemming A, Cao M, Crawford JM, Nelson DR, Liu C.

Gastroenterology. 2007 Nov;133(5):1649-59. Epub 2007 Sep 16.

PMID: 17983809 [PubMed - indexed for MEDLINE]

9:

Expressional screening of interferon-stimulated genes for antiviral activity against hepatitis C virus replication.

Itsui Y, Sakamoto N, Kurosaki M, Kanazawa N, Tanabe Y, Koyama T, Takeda Y, Nakagawa M, Kakinuma S, Sekine Y, Maekawa S, Enomoto N, Watanabe M.

J Viral Hepat. 2006 Oct;13(10):690-700.

PMID: 16970601 [PubMed - indexed for MEDLINE]

10:

Global transcriptional profiling demonstrates the combination of type I and type II interferon enhances antiviral and immune responses at clinically relevant doses.

Tan H, Derrick J, Hong J, Sanda C, Grosse WM, Edenberg HJ, Taylor M, Seiwert S, Blatt LM.

J Interferon Cytokine Res. 2005 Oct;25(10):632-49.

PMID: 16241862 [PubMed - indexed for MEDLINE]

11:

Antiviral actions of interferons.

Samuel CE.

Clin Microbiol Rev. 2001 Oct;14(4):778-809, table of contents. Review.

PMID: 11585785 [PubMed - indexed for MEDLINE]

12:

Mascot file parsing and quantification (MFPaQ), a new software to parse, validate, and quantify proteomics data generated by ICAT and SILAC mass spectrometric analyses: application to the proteomics study of membrane proteins from primary human endothelial cells.

Bouyssié D, Gonzalez de Peredo A, Mouton E, Albigot R, Roussel L, Ortega N, Cayrol C, Burlet-Schiltz O, Girard JP, Monsarrat B.

Mol Cell Proteomics. 2007 Sep;6(9):1621-37. Epub 2007 May 28.

PMID: 17533220 [PubMed - indexed for MEDLINE]

13:

Protein markers of ischemic insult in brain endothelial cells identified using 2D gel electrophoresis and ICAT-based quantitative proteomics.

Haqqani AS, Kelly J, Baumann E, Haseloff RF, Blasig IE, Stanimirovic DB.

J Proteome Res. 2007 Jan;6(1):226-39.

PMID: 17203967 [PubMed - indexed for MEDLINE]

14:

Changes in the proteome of Huh7 cells induced by transient expression of hepatitis D virus RNA and antigens.

Mota S, Mendes M, Penque D, Coelho AV, Cunha C.

J Proteomics. 2008 Apr 30;71(1):71-9. Epub 2008 Jan 3.

PMID: 18541475 [PubMed - indexed for MEDLINE]

15:

A comparative proteomic strategy for subcellular proteome research: ICAT approach coupled with bioinformatics prediction to ascertain rat liver mitochondrial proteins and indication of mitochondrial localization for catalase.

Jiang XS, Dai J, Sheng QH, Zhang L, Xia QC, Wu JR, Zeng R.

Mol Cell Proteomics. 2005 Jan;4(1):12-34. Epub 2004 Oct 25.

PMID: 15507458 [PubMed - indexed for MEDLINE]

16:

Current trends in computational inference from mass spectrometry-based proteomics.

Webb-Robertson BJ, Cannon WR.

Brief Bioinform. 2007 Sep;8(5):304-17. Epub 2007 Jun 20. Review.

PMID: 17584764 [PubMed - indexed for MEDLINE]

17:

Hepatitis C virus infection of primary tupaia hepatocytes leads to selection of quasispecies variants, induction of interferon-stimulated genes and NF-kappaB nuclear translocation.

Guitart A, Riezu-Boj JI, Elizalde E, Larrea E, Berasain C, Aldabe R, Civeira MP, Prieto J.

J Gen Virol. 2005 Nov;86(Pt 11):3065-74.

PMID: 16227229 [PubMed - indexed for MEDLINE]

18:

JC virus induces altered patterns of cellular gene expression: interferon-inducible genes as major transcriptional targets.

Verma S, Ziegler K, Ananthula P, Co JK, Frisque RJ, Yanagihara R, Nerurkar VR.

Virology. 2006 Feb 20;345(2):457-67. Epub 2005 Nov 17.

PMID: 16297951 [PubMed - indexed for MEDLINE]

19:

Proteome analysis of human liver carcinoma Huh7 cells harboring hepatitis C virus subgenomic replicon.

Fang C, Yi Z, Liu F, Lan S, Wang J, Lu H, Yang P, Yuan Z.

Proteomics. 2006 Jan;6(2):519-27.

PMID: 16317778 [PubMed - indexed for MEDLINE]

20:

Host cell responses induced by hepatitis C virus binding.

Fang X, Zeisel MB, Wilpert J, Gissler B, Thimme R, Kreutz C, Maiwald T, Timmer J, Kern WV, Donauer J, Geyer M, Walz G, Depla E, von Weizsäcker F, Blum HE, Baumert TF.

Hepatology. 2006 Jun;43(6):1326-36.

PMID: 16729312 [PubMed - indexed for MEDLINE]

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