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Microarray standard data set and figures of merit for comparing data processing methods and experiment designs.
He YD, Dai H, Schadt EE, Cavet G, Edwards SW, Stepaniants SB, Duenwald S, Kleinhanz R, Jones AR, Shoemaker DD, Stoughton RB.
Bioinformatics. 2003 May 22;19(8):956-65.
PMID: 12761058 [PubMed - indexed for MEDLINE]
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An evaluation of the performance of cDNA microarrays for detecting changes in global mRNA expression.
Yue H, Eastman PS, Wang BB, Minor J, Doctolero MH, Nuttall RL, Stack R, Becker JW, Montgomery JR, Vainer M, Johnston R.
Nucleic Acids Res. 2001 Apr 15;29(8):E41-1.
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Within the fold: assessing differential expression measures and reproducibility in microarray assays.
Yang IV, Chen E, Hasseman JP, Liang W, Frank BC, Wang S, Sharov V, Saeed AI, White J, Li J, Lee NH, Yeatman TJ, Quackenbush J.
Genome Biol. 2002 Oct 24;3(11):research0062. Epub 2002 Oct 24.
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Post-analysis follow-up and validation of microarray experiments.
Chuaqui RF, Bonner RF, Best CJ, Gillespie JW, Flaig MJ, Hewitt SM, Phillips JL, Krizman DB, Tangrea MA, Ahram M, Linehan WM, Knezevic V, Emmert-Buck MR.
Nat Genet. 2002 Dec;32 Suppl:509-14. Review.
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