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Items 1 - 20 of 154
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1:

Computational identification of developmental enhancers: conservation and function of transcription factor binding-site clusters in Drosophila melanogaster and Drosophila pseudoobscura.

Berman BP, Pfeiffer BD, Laverty TR, Salzberg SL, Rubin GM, Eisen MB, Celniker SE.

Genome Biol. 2004;5(9):R61. Epub 2004 Aug 20.

PMID: 15345045 [PubMed - indexed for MEDLINE]

2:

Functional analysis of eve stripe 2 enhancer evolution in Drosophila: rules governing conservation and change.

Ludwig MZ, Patel NH, Kreitman M.

Development. 1998 Mar;125(5):949-58.

PMID: 9449677 [PubMed - indexed for MEDLINE]

3:

Sepsid even-skipped enhancers are functionally conserved in Drosophila despite lack of sequence conservation.

Hare EE, Peterson BK, Iyer VN, Meier R, Eisen MB.

PLoS Genet. 2008 Jun 27;4(6):e1000106.

PMID: 18584029 [PubMed - indexed for MEDLINE]

4:

Characterization of the cis-regulatory region of the Drosophila homeotic gene Sex combs reduced.

Gindhart JG Jr, King AN, Kaufman TC.

Genetics. 1995 Feb;139(2):781-95.

PMID: 7713432 [PubMed - indexed for MEDLINE]

5:

Regulation of the twist target gene tinman by modular cis-regulatory elements during early mesoderm development.

Yin Z, Xu XL, Frasch M.

Development. 1997 Dec;124(24):4971-82.

PMID: 9362473 [PubMed - indexed for MEDLINE]

6:

Evolution of developmental genes: molecular microevolution of enhancer sequences at the Ubx locus in Drosophila and its impact on developmental phenotypes.

Phinchongsakuldit J, MacArthur S, Brookfield JF.

Mol Biol Evol. 2004 Feb;21(2):348-63. Epub 2003 Dec 5.

PMID: 14660693 [PubMed - indexed for MEDLINE]

7:

Ftz-F1 is a cofactor in Ftz activation of the Drosophila engrailed gene.

Florence B, Guichet A, Ephrussi A, Laughon A.

Development. 1997 Feb;124(4):839-47.

PMID: 9043065 [PubMed - indexed for MEDLINE]

8:

Computational identification of Ftz/Ftz-F1 downstream target genes.

Bowler T, Kosman D, Licht JD, Pick L.

Dev Biol. 2006 Nov 1;299(1):78-90. Epub 2006 Jul 12.

PMID: 16996052 [PubMed - indexed for MEDLINE]

9:

Extraction of functional binding sites from unique regulatory regions: the Drosophila early developmental enhancers.

Papatsenko DA, Makeev VJ, Lifanov AP, Régnier M, Nazina AG, Desplan C.

Genome Res. 2002 Mar;12(3):470-81.

PMID: 11875036 [PubMed - indexed for MEDLINE]

10:

Sequence conservation and combinatorial complexity of Drosophila neural precursor cell enhancers.

Brody T, Rasband W, Baler K, Kuzin A, Kundu M, Odenwald WF.

BMC Genomics. 2008 Aug 1;9:371.

PMID: 18673565 [PubMed - indexed for MEDLINE]

11:

Computation-based discovery of related transcriptional regulatory modules and motifs using an experimentally validated combinatorial model.

Halfon MS, Grad Y, Church GM, Michelson AM.

Genome Res. 2002 Jul;12(7):1019-28.

PMID: 12097338 [PubMed - indexed for MEDLINE]

12:

Computational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo.

Rajewsky N, Vergassola M, Gaul U, Siggia ED.

BMC Bioinformatics. 2002 Oct 24;3:30. Epub 2002 Oct 24.

PMID: 12398796 [PubMed - indexed for MEDLINE]

13:

Transcription control of a gene for Drosophila transcription factor, DREF by DRE and cis-elements conserved between Drosophila melanogaster and virilis.

Kwon E, Seto H, Hirose F, Ohshima N, Takahashi Y, Nishida Y, Yamaguchi M.

Gene. 2003 May 8;309(2):101-16.

PMID: 12758126 [PubMed - indexed for MEDLINE]

14:

Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome.

Bergman CM, Pfeiffer BD, Rincón-Limas DE, Hoskins RA, Gnirke A, Mungall CJ, Wang AM, Kronmiller B, Pacleb J, Park S, Stapleton M, Wan K, George RA, de Jong PJ, Botas J, Rubin GM, Celniker SE.

Genome Biol. 2002;3(12):RESEARCH0086. Epub 2002 Dec 30.

PMID: 12537575 [PubMed - indexed for MEDLINE]

15:

Transcriptional control in the segmentation gene network of Drosophila.

Schroeder MD, Pearce M, Fak J, Fan H, Unnerstall U, Emberly E, Rajewsky N, Siggia ED, Gaul U.

PLoS Biol. 2004 Sep;2(9):E271. Epub 2004 Aug 31.

PMID: 15340490 [PubMed - indexed for MEDLINE]

16:

Intron of the mouse Hoxa-7 gene contains conserved homeodomain binding sites that can function as an enhancer element in Drosophila.

Haerry TE, Gehring WJ.

Proc Natl Acad Sci U S A. 1996 Nov 26;93(24):13884-9.

PMID: 8943030 [PubMed - indexed for MEDLINE]

17:

A screen for genes that interact with the Drosophila pair-rule segmentation gene fushi tarazu.

Kankel MW, Duncan DM, Duncan I.

Genetics. 2004 Sep;168(1):161-80.

PMID: 15454535 [PubMed - indexed for MEDLINE]

18:

Transcriptional regulation of the Drosophila homeotic gene teashirt by the homeodomain protein Fushi tarazu.

Coré N, Charroux B, McCormick A, Vola C, Fasano L, Scott MP, Kerridge S.

Mech Dev. 1997 Nov;68(1-2):157-72.

PMID: 9431813 [PubMed - indexed for MEDLINE]

19:

A binding site for multiple transcriptional activators in the fushi tarazu proximal enhancer is essential for gene expression in vivo.

Han W, Yu Y, Su K, Kohanski RA, Pick L.

Mol Cell Biol. 1998 Jun;18(6):3384-94.

PMID: 9584179 [PubMed - indexed for MEDLINE]

20:

Drosophila Paired regulates late even-skipped expression through a composite binding site for the paired domain and the homeodomain.

Fujioka M, Miskiewicz P, Raj L, Gulledge AA, Weir M, Goto T.

Development. 1996 Sep;122(9):2697-707.

PMID: 8787744 [PubMed - indexed for MEDLINE]

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