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Items 1 - 20 of 264
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1:

Global nucleosome occupancy in yeast.

Bernstein BE, Liu CL, Humphrey EL, Perlstein EO, Schreiber SL.

Genome Biol. 2004;5(9):R62. Epub 2004 Aug 20.

PMID: 15345046 [PubMed - indexed for MEDLINE]

2:

A chromatin-mediated mechanism for specification of conditional transcription factor targets.

Buck MJ, Lieb JD.

Nat Genet. 2006 Dec;38(12):1446-51. Epub 2006 Nov 12.

PMID: 17099712 [PubMed - indexed for MEDLINE]

3:

Different roles for abf1p and a T-rich promoter element in nucleosome organization of the yeast RPS28A gene.

Lascaris RF, Groot E, Hoen PB, Mager WH, Planta RJ.

Nucleic Acids Res. 2000 Mar 15;28(6):1390-6.

PMID: 10684934 [PubMed - indexed for MEDLINE]

4:

A nucleosome-guided map of transcription factor binding sites in yeast.

Narlikar L, Gordân R, Hartemink AJ.

PLoS Comput Biol. 2007 Nov;3(11):e215. Epub 2007 Sep 24.

PMID: 17997593 [PubMed - indexed for MEDLINE]

5:

Genome-scale identification of nucleosome positions in S. cerevisiae.

Yuan GC, Liu YJ, Dion MF, Slack MD, Wu LF, Altschuler SJ, Rando OJ.

Science. 2005 Jul 22;309(5734):626-30. Epub 2005 Jun 16.

PMID: 15961632 [PubMed - indexed for MEDLINE]

6:

A high-resolution atlas of nucleosome occupancy in yeast.

Lee W, Tillo D, Bray N, Morse RH, Davis RW, Hughes TR, Nislow C.

Nat Genet. 2007 Oct;39(10):1235-44. Epub 2007 Sep 16.

PMID: 17873876 [PubMed - indexed for MEDLINE]

7:

Fine-structure analysis of ribosomal protein gene transcription.

Zhao Y, McIntosh KB, Rudra D, Schawalder S, Shore D, Warner JR.

Mol Cell Biol. 2006 Jul;26(13):4853-62.

PMID: 16782874 [PubMed - indexed for MEDLINE]

8:

Comparison of ABF1 and RAP1 in chromatin opening and transactivator potentiation in the budding yeast Saccharomyces cerevisiae.

Yarragudi A, Miyake T, Li R, Morse RH.

Mol Cell Biol. 2004 Oct;24(20):9152-64.

PMID: 15456886 [PubMed - indexed for MEDLINE]

9:

Heat shock factor can activate transcription while bound to nucleosomal DNA in Saccharomyces cerevisiae.

Pederson DS, Fidrych T.

Mol Cell Biol. 1994 Jan;14(1):189-99.

PMID: 8264586 [PubMed - indexed for MEDLINE]

10:

A genomic code for nucleosome positioning.

Segal E, Fondufe-Mittendorf Y, Chen L, Thåström A, Field Y, Moore IK, Wang JP, Widom J.

Nature. 2006 Aug 17;442(7104):772-8. Epub 2006 Jul 19.

PMID: 16862119 [PubMed - indexed for MEDLINE]

11:

A nucleosome precludes binding of the transcription factor Pho4 in vivo to a critical target site in the PHO5 promoter.

Venter U, Svaren J, Schmitz J, Schmid A, Hörz W.

EMBO J. 1994 Oct 17;13(20):4848-55.

PMID: 7957054 [PubMed - indexed for MEDLINE]

12:

Nucleosomes unfold completely at a transcriptionally active promoter.

Boeger H, Griesenbeck J, Strattan JS, Kornberg RD.

Mol Cell. 2003 Jun;11(6):1587-98.

PMID: 12820971 [PubMed - indexed for MEDLINE]

13:

Chromatin disassembly mediated by the histone chaperone Asf1 is essential for transcriptional activation of the yeast PHO5 and PHO8 genes.

Adkins MW, Howar SR, Tyler JK.

Mol Cell. 2004 Jun 4;14(5):657-66.

PMID: 15175160 [PubMed - indexed for MEDLINE]

14:

Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection.

Liu X, Lee CK, Granek JA, Clarke ND, Lieb JD.

Genome Res. 2006 Dec;16(12):1517-28. Epub 2006 Oct 19.

PMID: 17053089 [PubMed - indexed for MEDLINE]

15:

Genome-wide analysis of transcriptional dependence and probable target sites for Abf1 and Rap1 in Saccharomyces cerevisiae.

Yarragudi A, Parfrey LW, Morse RH.

Nucleic Acids Res. 2007;35(1):193-202. Epub 2006 Dec 7.

PMID: 17158163 [PubMed - indexed for MEDLINE]

16:

Comparison of nucleosome remodeling by the yeast transcription factor Pho4 and the glucocorticoid receptor.

Then Bergh F, Flinn EM, Svaren J, Wright AP, Hörz W.

J Biol Chem. 2000 Mar 24;275(12):9035-42.

PMID: 10722753 [PubMed - indexed for MEDLINE]

17:

Transcription factors vs nucleosomes: regulation of the PHO5 promoter in yeast.

Svaren J, Hörz W.

Trends Biochem Sci. 1997 Mar;22(3):93-7. Review.

PMID: 9066259 [PubMed - indexed for MEDLINE]

18:

Cbf1p is required for chromatin remodeling at promoter-proximal CACGTG motifs in yeast.

Kent NA, Eibert SM, Mellor J.

J Biol Chem. 2004 Jun 25;279(26):27116-23. Epub 2004 Apr 24.

PMID: 15111622 [PubMed - indexed for MEDLINE]

19:

Global regulation by the yeast Spt10 protein is mediated through chromatin structure and the histone upstream activating sequence elements.

Eriksson PR, Mendiratta G, McLaughlin NB, Wolfsberg TG, Mariño-Ramírez L, Pompa TA, Jainerin M, Landsman D, Shen CH, Clark DJ.

Mol Cell Biol. 2005 Oct;25(20):9127-37.

PMID: 16199888 [PubMed - indexed for MEDLINE]

20:

Evidence that nucleosomes on the mouse mammary tumor virus promoter adopt specific translational positions.

Bresnick EH, Rories C, Hager GL.

Nucleic Acids Res. 1992 Feb 25;20(4):865-70.

PMID: 1311832 [PubMed - indexed for MEDLINE]

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