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1:

Phylogenomic evidence supports past endosymbiosis, intracellular and horizontal gene transfer in Cryptosporidium parvum.

Huang J, Mullapudi N, Lancto CA, Scott M, Abrahamsen MS, Kissinger JC.

Genome Biol. 2004;5(11):R88. Epub 2004 Oct 19.

PMID: 15535864 [PubMed - indexed for MEDLINE]

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2:

A first glimpse into the pattern and scale of gene transfer in Apicomplexa.

Huang J, Mullapudi N, Sicheritz-Ponten T, Kissinger JC.

Int J Parasitol. 2004 Mar 9;34(3):265-74.

PMID: 15003488 [PubMed - indexed for MEDLINE]

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3:

Phylogenomic analysis identifies red algal genes of endosymbiotic origin in the chromalveolates.

Li S, Nosenko T, Hackett JD, Bhattacharya D.

Mol Biol Evol. 2006 Mar;23(3):663-74. Epub 2005 Dec 15.

PMID: 16357039 [PubMed - indexed for MEDLINE]

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4:

Evolutionary origins of the eukaryotic shikimate pathway: gene fusions, horizontal gene transfer, and endosymbiotic replacements.

Richards TA, Dacks JB, Campbell SA, Blanchard JL, Foster PG, McLeod R, Roberts CW.

Eukaryot Cell. 2006 Sep;5(9):1517-31.

PMID: 16963634 [PubMed - indexed for MEDLINE]

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5:

Identification of putative cis-regulatory elements in Cryptosporidium parvum by de novo pattern finding.

Mullapudi N, Lancto CA, Abrahamsen MS, Kissinger JC.

BMC Genomics. 2007 Jan 9;8:13.

PMID: 17212834 [PubMed - indexed for MEDLINE]

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7:

Reduction and compaction in the genome of the apicomplexan parasite Cryptosporidium parvum.

Keeling PJ.

Dev Cell. 2004 May;6(5):614-6. Review.

PMID: 15130487 [PubMed - indexed for MEDLINE]

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8:

Characterization of a mitochondrion-like organelle in Cryptosporidium parvum.

Putignani L, Tait A, Smith HV, Horner D, Tovar J, Tetley L, Wastling JM.

Parasitology. 2004 Jul;129(Pt 1):1-18.

PMID: 15267107 [PubMed - indexed for MEDLINE]

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9:

Mining the Plasmodium genome database to define organellar function: what does the apicoplast do?

Roos DS, Crawford MJ, Donald RG, Fraunholz M, Harb OS, He CY, Kissinger JC, Shaw MK, Striepen B.

Philos Trans R Soc Lond B Biol Sci. 2002 Jan 29;357(1417):35-46.

PMID: 11839180 [PubMed - indexed for MEDLINE]

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10:

Did an ancient chlamydial endosymbiosis facilitate the establishment of primary plastids?

Huang J, Gogarten JP.

Genome Biol. 2007;8(6):R99.

PMID: 17547748 [PubMed - indexed for MEDLINE]

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11:

Evolution of Cryptosporidium parvum lactate dehydrogenase from malate dehydrogenase by a very recent event of gene duplication.

Madern D, Cai X, Abrahamsen MS, Zhu G.

Mol Biol Evol. 2004 Mar;21(3):489-97. Epub 2003 Dec 23.

PMID: 14694073 [PubMed - indexed for MEDLINE]

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12:

Wolbachia genome integrated in an insect chromosome: evolution and fate of laterally transferred endosymbiont genes.

Nikoh N, Tanaka K, Shibata F, Kondo N, Hizume M, Shimada M, Fukatsu T.

Genome Res. 2008 Feb;18(2):272-80. Epub 2007 Dec 11.

PMID: 18073380 [PubMed - indexed for MEDLINE]

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13:

Evidence for mitochondrial-derived alternative oxidase in the apicomplexan parasite Cryptosporidium parvum: a potential anti-microbial agent target.

Roberts CW, Roberts F, Henriquez FL, Akiyoshi D, Samuel BU, Richards TA, Milhous W, Kyle D, McIntosh L, Hill GC, Chaudhuri M, Tzipori S, McLeod R.

Int J Parasitol. 2004 Mar 9;34(3):297-308.

PMID: 15003491 [PubMed - indexed for MEDLINE]

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14:

Chlamydial genes shed light on the evolution of photoautotrophic eukaryotes.

Becker B, Hoef-Emden K, Melkonian M.

BMC Evol Biol. 2008 Jul 15;8:203.

PMID: 18627593 [PubMed - indexed for MEDLINE]

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15:

Mosaic origin of the heme biosynthesis pathway in photosynthetic eukaryotes.

Oborník M, Green BR.

Mol Biol Evol. 2005 Dec;22(12):2343-53. Epub 2005 Aug 10.

PMID: 16093570 [PubMed - indexed for MEDLINE]

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16:

Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans.

Archibald JM, Rogers MB, Toop M, Ishida K, Keeling PJ.

Proc Natl Acad Sci U S A. 2003 Jun 24;100(13):7678-83. Epub 2003 May 30.

PMID: 12777624 [PubMed - indexed for MEDLINE]

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17:

The genome of Cryptosporidium hominis.

Xu P, Widmer G, Wang Y, Ozaki LS, Alves JM, Serrano MG, Puiu D, Manque P, Akiyoshi D, Mackey AJ, Pearson WR, Dear PH, Bankier AT, Peterson DL, Abrahamsen MS, Kapur V, Tzipori S, Buck GA.

Nature. 2004 Oct 28;431(7012):1107-12. Erratum in: Nature. 2004 Nov 18;432(7015):415.

PMID: 15510150 [PubMed - indexed for MEDLINE]

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18:

A genomic survey of the fish parasite Spironucleus salmonicida indicates genomic plasticity among diplomonads and significant lateral gene transfer in eukaryote genome evolution.

Andersson JO, Sjögren AM, Horner DS, Murphy CA, Dyal PL, Svärd SG, Logsdon JM Jr, Ragan MA, Hirt RP, Roger AJ.

BMC Genomics. 2007 Feb 14;8:51.

PMID: 17298675 [PubMed - indexed for MEDLINE]

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19:

Cryptosporidium parvum gene discovery.

Abrahamsen MS.

Adv Exp Med Biol. 1999;473:241-7. Review.

PMID: 10659365 [PubMed - indexed for MEDLINE]

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20:

Genetic complementation in apicomplexan parasites.

Striepen B, White MW, Li C, Guerini MN, Malik SB, Logsdon JM Jr, Liu C, Abrahamsen MS.

Proc Natl Acad Sci U S A. 2002 Apr 30;99(9):6304-9. Epub 2002 Apr 16.

PMID: 11959921 [PubMed - indexed for MEDLINE]

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