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Items 1 - 20 of 140
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1:

The ASRG database: identification and survey of Arabidopsis thaliana genes involved in pre-mRNA splicing.

Wang BB, Brendel V.

Genome Biol. 2004;5(12):R102. Epub 2004 Nov 29.

PMID: 15575968 [PubMed - indexed for MEDLINE]

2:

Evolutionary conservation of minor U12-type spliceosome between plants and humans.

Lorkovic ZJ, Lehner R, Forstner C, Barta A.

RNA. 2005 Jul;11(7):1095-107.

PMID: 15987817 [PubMed - indexed for MEDLINE]

3:

Full-length messenger RNA sequences greatly improve genome annotation.

Haas BJ, Volfovsky N, Town CD, Troukhan M, Alexandrov N, Feldmann KA, Flavell RB, White O, Salzberg SL.

Genome Biol. 2002;3(6):RESEARCH0029. Epub 2002 May 30.

PMID: 12093376 [PubMed - indexed for MEDLINE]

4:

Protein encoding genes in an ancient plant: analysis of codon usage, retained genes and splice sites in a moss, Physcomitrella patens.

Rensing SA, Fritzowsky D, Lang D, Reski R.

BMC Genomics. 2005 Mar 22;6(1):43.

PMID: 15784153 [PubMed - indexed for MEDLINE]

5:

Conservation of functional features of U6atac and U12 snRNAs between vertebrates and higher plants.

Shukla GC, Padgett RA.

RNA. 1999 Apr;5(4):525-38.

PMID: 10199569 [PubMed - indexed for MEDLINE]

6:

Assembly of a gene sequence tag microarray by reversible biotin-streptavidin capture for transcript analysis of Arabidopsis thaliana.

Wirta V, Holmberg A, Lukacs M, Nilsson P, Hilson P, Uhlén M, Bhalerao RP, Lundeberg J.

BMC Biotechnol. 2005 Feb 3;5:5.

PMID: 15689241 [PubMed - indexed for MEDLINE]

7:

Three new nuclear genes, sigD, sigE and sigF, encoding putative plastid RNA polymerase sigma factors in Aarabidopsis thaliana.

Fujiwara M, Nagashima A, Kanamaru K, Tanaka K, Takahashi H.

FEBS Lett. 2000 Sep 8;481(1):47-52.

PMID: 10984613 [PubMed - indexed for MEDLINE]

8:

The hidden duplication past of Arabidopsis thaliana.

Simillion C, Vandepoele K, Van Montagu MC, Zabeau M, Van de Peer Y.

Proc Natl Acad Sci U S A. 2002 Oct 15;99(21):13627-32. Epub 2002 Oct 8.

PMID: 12374856 [PubMed - indexed for MEDLINE]

9:

Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences.

Iida K, Seki M, Sakurai T, Satou M, Akiyama K, Toyoda T, Konagaya A, Shinozaki K.

Nucleic Acids Res. 2004 Sep 27;32(17):5096-103. Print 2004.

PMID: 15452276 [PubMed - indexed for MEDLINE]

10:

Alternative splicing at NAGNAG acceptors in Arabidopsis thaliana SR and SR-related protein-coding genes.

Schindler S, Szafranski K, Hiller M, Ali GS, Palusa SG, Backofen R, Platzer M, Reddy AS.

BMC Genomics. 2008 Apr 10;9:159.

PMID: 18402682 [PubMed - indexed for MEDLINE]

11:

U4 small nuclear RNA can function in both the major and minor spliceosomes.

Shukla GC, Padgett RA.

Proc Natl Acad Sci U S A. 2004 Jan 6;101(1):93-8. Epub 2003 Dec 22.

PMID: 14691257 [PubMed - indexed for MEDLINE]

12:

Molecular characterization of two anther-specific genes encoding putative RNA-binding proteins, AtRBP45s, in Arabidopsis thaliana.

Park JI, Endo M, Kazama T, Saito H, Hakozaki H, Takada Y, Kawagishi-Kobayashi M, Watanabe M.

Genes Genet Syst. 2006 Oct;81(5):355-9.

PMID: 17159297 [PubMed - indexed for MEDLINE]

13:

Characterization of 43 non-protein-coding mRNA genes in Arabidopsis, including the MIR162a-derived transcripts.

Hirsch J, Lefort V, Vankersschaver M, Boualem A, Lucas A, Thermes C, d'Aubenton-Carafa Y, Crespi M.

Plant Physiol. 2006 Apr;140(4):1192-204. Epub 2006 Feb 24.

PMID: 16500993 [PubMed - indexed for MEDLINE]

14:

Orphan transcripts in Arabidopsis thaliana: identification of several hundred previously unrecognized genes.

Riaño-Pachón DM, Dreyer I, Mueller-Roeber B.

Plant J. 2005 Jul;43(2):205-12.

PMID: 15998307 [PubMed - indexed for MEDLINE]

15:

The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

Swarbreck D, Wilks C, Lamesch P, Berardini TZ, Garcia-Hernandez M, Foerster H, Li D, Meyer T, Muller R, Ploetz L, Radenbaugh A, Singh S, Swing V, Tissier C, Zhang P, Huala E.

Nucleic Acids Res. 2008 Jan;36(Database issue):D1009-14. Epub 2007 Nov 5.

PMID: 17986450 [PubMed - indexed for MEDLINE]

16:

Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays.

Stolc V, Samanta MP, Tongprasit W, Sethi H, Liang S, Nelson DC, Hegeman A, Nelson C, Rancour D, Bednarek S, Ulrich EL, Zhao Q, Wrobel RL, Newman CS, Fox BG, Phillips GN Jr, Markley JL, Sussman MR.

Proc Natl Acad Sci U S A. 2005 Mar 22;102(12):4453-8. Epub 2005 Mar 8.

PMID: 15755812 [PubMed - indexed for MEDLINE]

17:

A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana.

Pertea M, Mount SM, Salzberg SL.

BMC Bioinformatics. 2007 May 21;8:159.

PMID: 17517127 [PubMed - indexed for MEDLINE]

18:

A subgroup of MYB transcription factor genes undergoes highly conserved alternative splicing in Arabidopsis and rice.

Li J, Li X, Guo L, Lu F, Feng X, He K, Wei L, Chen Z, Qu LJ, Gu H.

J Exp Bot. 2006;57(6):1263-73. Epub 2006 Mar 10.

PMID: 16531467 [PubMed - indexed for MEDLINE]

19:

Monitoring changes in alternative precursor messenger RNA splicing in multiple gene transcripts.

Simpson CG, Fuller J, Maronova M, Kalyna M, Davidson D, McNicol J, Barta A, Brown JW.

Plant J. 2008 Mar;53(6):1035-48. Epub 2007 Dec 15.

PMID: 18088312 [PubMed - indexed for MEDLINE]

20:

Genome-wide prediction and identification of cis-natural antisense transcripts in Arabidopsis thaliana.

Wang XJ, Gaasterland T, Chua NH.

Genome Biol. 2005;6(4):R30. Epub 2005 Mar 15.

PMID: 15833117 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 140
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