Your browser version may not work well with NCBI's Web applications. More information here...

Recent Activity

Items 1 - 20 of 117
of 6Next
1:

Chromatin architecture and gene expression in Escherichia coli.

Willenbrock H, Ussery DW.

Genome Biol. 2004;5(12):252. Epub 2004 Dec 1. Review.

PMID: 15575978 [PubMed - indexed for MEDLINE]

2:

DNA supercoiling, chromatin structure and the regulation of gene expression.

Higgins CF.

Antonie Van Leeuwenhoek. 1990 Oct;58(3):155. No abstract available.

PMID: 2256674 [PubMed - indexed for MEDLINE]

3:

Homeostatic regulation of supercoiling sensitivity coordinates transcription of the bacterial genome.

Blot N, Mavathur R, Geertz M, Travers A, Muskhelishvili G.

EMBO Rep. 2006 Jul;7(7):710-5. Epub 2006 Jun 16.

PMID: 16799466 [PubMed - indexed for MEDLINE]

4:

Genome-wide prediction of G4 DNA as regulatory motifs: role in Escherichia coli global regulation.

Rawal P, Kummarasetti VB, Ravindran J, Kumar N, Halder K, Sharma R, Mukerji M, Das SK, Chowdhury S.

Genome Res. 2006 May;16(5):644-55.

PMID: 16651665 [PubMed - indexed for MEDLINE]

6:

A genetic selection for supercoiling mutants of Escherichia coli reveals proteins implicated in chromosome structure.

Hardy CD, Cozzarelli NR.

Mol Microbiol. 2005 Sep;57(6):1636-52.

PMID: 16135230 [PubMed - indexed for MEDLINE]

7:

Prediction of highly expressed genes in microbes based on chromatin accessibility.

Willenbrock H, Ussery DW.

BMC Mol Biol. 2007 Feb 13;8:11.

PMID: 17295928 [PubMed - indexed for MEDLINE]

8:

Dynamic state of DNA topology is essential for genome condensation in bacteria.

Ohniwa RL, Morikawa K, Kim J, Ohta T, Ishihama A, Wada C, Takeyasu K.

EMBO J. 2006 Nov 29;25(23):5591-602. Epub 2006 Nov 9.

PMID: 17093499 [PubMed - indexed for MEDLINE]

9:

DNA supercoiling - a global transcriptional regulator for enterobacterial growth?

Travers A, Muskhelishvili G.

Nat Rev Microbiol. 2005 Feb;3(2):157-69. Review.

PMID: 15685225 [PubMed - indexed for MEDLINE]

10:

Immobilization of Escherichia coli RNA polymerase and location of binding sites by use of chromatin immunoprecipitation and microarrays.

Herring CD, Raffaelle M, Allen TE, Kanin EI, Landick R, Ansari AZ, Palsson BØ.

J Bacteriol. 2005 Sep;187(17):6166-74.

PMID: 16109958 [PubMed - indexed for MEDLINE]

11:

Bacterial repression loops require enhanced DNA flexibility.

Becker NA, Kahn JD, Maher LJ 3rd.

J Mol Biol. 2005 Jun 17;349(4):716-30. Erratum in: J Mol Biol. 2005 Nov 4;353(4):924-6.

PMID: 15893770 [PubMed - indexed for MEDLINE]

12:

Decoding the nucleoid organisation of Bacillus subtilis and Escherichia coli through gene expression data.

Carpentier AS, Torrésani B, Grossmann A, Hénaut A.

BMC Genomics. 2005 Jun 6;6(1):84.

PMID: 15938745 [PubMed - indexed for MEDLINE]

13:

Escherichia coli histone-like protein H-NS preferentially binds to horizontally acquired DNA in association with RNA polymerase.

Oshima T, Ishikawa S, Kurokawa K, Aiba H, Ogasawara N.

DNA Res. 2006 Aug 31;13(4):141-53. Epub 2006 Oct 17.

PMID: 17046956 [PubMed - indexed for MEDLINE]

14:

Coupling the distribution of RNA polymerase to global gene regulation and the dynamic structure of the bacterial nucleoid in Escherichia coli.

Jin DJ, Cabrera JE.

J Struct Biol. 2006 Nov;156(2):284-91. Epub 2006 Jul 21. Review.

PMID: 16934488 [PubMed - indexed for MEDLINE]

15:

Analysis of global gene expression and double-strand-break formation in DNA adenine methyltransferase- and mismatch repair-deficient Escherichia coli.

Robbins-Manke JL, Zdraveski ZZ, Marinus M, Essigmann JM.

J Bacteriol. 2005 Oct;187(20):7027-37.

PMID: 16199573 [PubMed - indexed for MEDLINE]

16:

SbcCD regulation and localization in Escherichia coli.

Darmon E, Lopez-Vernaza MA, Helness AC, Borking A, Wilson E, Thacker Z, Wardrope L, Leach DR.

J Bacteriol. 2007 Sep;189(18):6686-94. Epub 2007 Jul 20.

PMID: 17644583 [PubMed - indexed for MEDLINE]

17:

Negative regulation of DNA repair gene (ung) expression by the CpxR/CpxA two-component system in Escherichia coli K-12 and induction of mutations by increased expression of CpxR.

Ogasawara H, Teramoto J, Hirao K, Yamamoto K, Ishihama A, Utsumi R.

J Bacteriol. 2004 Dec;186(24):8317-25.

PMID: 15576781 [PubMed - indexed for MEDLINE]

18:

Large-scale chromatin structure and function.

Belmont AS, Dietzel S, Nye AC, Strukov YG, Tumbar T.

Curr Opin Cell Biol. 1999 Jun;11(3):307-11. Review.

PMID: 10395564 [PubMed - indexed for MEDLINE]

19:

DNA supercoiling in chromatin structure and gene expression.

Freeman LA, Garrard WT.

Crit Rev Eukaryot Gene Expr. 1992;2(2):165-209. Review. No abstract available.

PMID: 1581628 [PubMed - indexed for MEDLINE]

20:

Using gene expression data and network topology to detect substantial pathways, clusters and switches during oxygen deprivation of Escherichia coli.

Schramm G, Zapatka M, Eils R, König R.

BMC Bioinformatics. 2007 May 8;8:149.

PMID: 17488495 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 117
of 6Next