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Accelerated evolution associated with genome reduction in a free-living prokaryote.

Dufresne A, Garczarek L, Partensky F.

Genome Biol. 2005;6(2):R14. Epub 2005 Jan 14.

PMID: 15693943 [PubMed - indexed for MEDLINE]

Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome.

Dufresne A, Salanoubat M, Partensky F, Artiguenave F, Axmann IM, Barbe V, Duprat S, Galperin MY, Koonin EV, Le Gall F, Makarova KS, Ostrowski M, Oztas S, Robert C, Rogozin IB, Scanlan DJ, Tandeau de Marsac N, Weissenbach J, Wincker P, Wolf YI, Hess WR.

Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):10020-5. Epub 2003 Aug 13.

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Environmental sequence data from the Sargasso Sea reveal that the characteristics of genome reduction in Prochlorococcus are not a harbinger for an escalation in genetic drift.

Hu J, Blanchard JL.

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Gene expression level shapes the amino acid usages in Prochlorococcus marinus MED4.

Banerjee T, Ghosh TC.

J Biomol Struct Dyn. 2006 Apr;23(5):547-54.

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Mutation rate and genome reduction in endosymbiotic and free-living bacteria.

Marais GA, Calteau A, Tenaillon O.

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Patterns and implications of gene gain and loss in the evolution of Prochlorococcus.

Kettler GC, Martiny AC, Huang K, Zucker J, Coleman ML, Rodrigue S, Chen F, Lapidus A, Ferriera S, Johnson J, Steglich C, Church GM, Richardson P, Chisholm SW.

PLoS Genet. 2007 Dec;3(12):e231.

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Genome-wide expression dynamics of a marine virus and host reveal features of co-evolution.

Lindell D, Jaffe JD, Coleman ML, Futschik ME, Axmann IM, Rector T, Kettler G, Sullivan MB, Steen R, Hess WR, Church GM, Chisholm SW.

Nature. 2007 Sep 6;449(7158):83-6.

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Phycobiliprotein genes of the marine photosynthetic prokaryote Prochlorococcus: evidence for rapid evolution of genetic heterogeneity.

Ting CS, Rocap G, King J, Chisholm SW.

Microbiology. 2001 Nov;147(Pt 11):3171-82.

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A green light-absorbing phycoerythrin is present in the high-light-adapted marine cyanobacterium Prochlorococcus sp. MED4.

Steglich C, Frankenberg-Dinkel N, Penno S, Hess WR.

Environ Microbiol. 2005 Oct;7(10):1611-8.

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Cryo-electron tomography reveals the comparative three-dimensional architecture of Prochlorococcus, a globally important marine cyanobacterium.

Ting CS, Hsieh C, Sundararaman S, Mannella C, Marko M.

J Bacteriol. 2007 Jun;189(12):4485-93. Epub 2007 Apr 20.

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Identification of chlorophyllide a oxygenase in the Prochlorococcus genome by a comparative genomic approach.

Satoh S, Tanaka A.

Plant Cell Physiol. 2006 Dec;47(12):1622-9. Epub 2006 Oct 27.

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The photosynthetic apparatus of Prochlorococcus: Insights through comparative genomics.

Hess WR, Rocap G, Ting CS, Larimer F, Stilwagen S, Lamerdin J, Chisholm SW.

Photosynth Res. 2001;70(1):53-71.

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Genomic islands and the ecology and evolution of Prochlorococcus.

Coleman ML, Sullivan MB, Martiny AC, Steglich C, Barry K, Delong EF, Chisholm SW.

Science. 2006 Mar 24;311(5768):1768-70.

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Phosphate acquisition genes in Prochlorococcus ecotypes: evidence for genome-wide adaptation.

Martiny AC, Coleman ML, Chisholm SW.

Proc Natl Acad Sci U S A. 2006 Aug 15;103(33):12552-7. Epub 2006 Aug 8.

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Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations.

Sullivan MB, Coleman ML, Weigele P, Rohwer F, Chisholm SW.

PLoS Biol. 2005 May;3(5):e144. Epub 2005 Apr 19.

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Low genomic diversity in tropical oceanic N2-fixing cyanobacteria.

Zehr JP, Bench SR, Mondragon EA, McCarren J, DeLong EF.

Proc Natl Acad Sci U S A. 2007 Nov 6;104(45):17807-12. Epub 2007 Oct 30.

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Multiplication of antenna genes as a major adaptation to low light in a marine prokaryote.

Garczarek L, Hess WR, Holtzendorff J, van der Staay GW, Partensky F.

Proc Natl Acad Sci U S A. 2000 Apr 11;97(8):4098-101.

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Increased rates of sequence evolution in endosymbiotic bacteria and fungi with small effective population sizes.

Woolfit M, Bromham L.

Mol Biol Evol. 2003 Sep;20(9):1545-55. Epub 2003 Jun 27.

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Being pathogenic, plastic, and sexual while living with a nearly minimal bacterial genome.

Sirand-Pugnet P, Lartigue C, Marenda M, Jacob D, Barré A, Barbe V, Schenowitz C, Mangenot S, Couloux A, Segurens B, de Daruvar A, Blanchard A, Citti C.

PLoS Genet. 2007 May 18;3(5):e75.

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Genome streamlining results in loss of robustness of the circadian clock in the marine cyanobacterium Prochlorococcus marinus PCC 9511.

Holtzendorff J, Partensky F, Mella D, Lennon JF, Hess WR, Garczarek L.

J Biol Rhythms. 2008 Jun;23(3):187-99.

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