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Items 1 - 20 of 314
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1:

The Adult Mouse Anatomical Dictionary: a tool for annotating and integrating data.

Hayamizu TF, Mangan M, Corradi JP, Kadin JA, Ringwald M.

Genome Biol. 2005;6(3):R29. Epub 2005 Feb 15.

PMID: 15774030 [PubMed - indexed for MEDLINE]

2:

Of mice and men: aligning mouse and human anatomies.

Bodenreider O, Hayamizu TF, Ringwald M, De Coronado S, Zhang S.

AMIA Annu Symp Proc. 2005:61-5.

PMID: 16779002 [PubMed - indexed for MEDLINE]

3:

OntologyWidget - a reusable, embeddable widget for easily locating ontology terms.

Beauheim CC, Wymore F, Nitzberg M, Zachariah ZK, Jin H, Skene JH, Ball CA, Sherlock G.

BMC Bioinformatics. 2007 Sep 13;8:338.

PMID: 17854506 [PubMed - indexed for MEDLINE]

4:

A "systematics" tool for medical terminologies.

Tao Y, Mendonca EA, Lussier YA.

AMIA Annu Symp Proc. 2003:1028.

PMID: 14728531 [PubMed - indexed for MEDLINE]

5:

The Mammalian Phenotype Ontology as a tool for annotating, analyzing and comparing phenotypic information.

Smith CL, Goldsmith CA, Eppig JT.

Genome Biol. 2005;6(1):R7. Epub 2004 Dec 15.

PMID: 15642099 [PubMed - indexed for MEDLINE]

6:

Gene and protein nomenclature in public databases.

Fundel K, Zimmer R.

BMC Bioinformatics. 2006 Aug 9;7:372.

PMID: 16899134 [PubMed - indexed for MEDLINE]

7:

The data dictionary--a controlled vocabulary for integrating clinical databases and medical knowledge bases.

Linnarsson R, Wigertz O.

Methods Inf Med. 1989 Apr;28(2):78-85.

PMID: 2725330 [PubMed - indexed for MEDLINE]

8:

The design and implementation of a picklist authoring tool.

Zhuo N, Rocha RA, Huff SM.

AMIA Annu Symp Proc. 2003:1061.

PMID: 14728564 [PubMed - indexed for MEDLINE]

9:

Problems and solutions with integrating terminologies into evolving knowledge bases.

Rickard KL, Mejino JL Jr, Martin RF, Agoncillo AV, Rosse C.

Stud Health Technol Inform. 2004;107(Pt 1):420-4.

PMID: 15360847 [PubMed - indexed for MEDLINE]

10:

GOLEM: an interactive graph-based gene-ontology navigation and analysis tool.

Sealfon RS, Hibbs MA, Huttenhower C, Myers CL, Troyanskaya OG.

BMC Bioinformatics. 2006 Oct 10;7:443.

PMID: 17032457 [PubMed - indexed for MEDLINE]

11:

The mouse genome database (MGD): new features facilitating a model system.

Eppig JT, Blake JA, Bult CJ, Kadin JA, Richardson JE; Mouse Genome Database Group.

Nucleic Acids Res. 2007 Jan;35(Database issue):D630-7. Epub 2006 Nov 29.

PMID: 17135206 [PubMed - indexed for MEDLINE]

12:

Standardized terminology for clinical trial protocols based on top-level ontological categories.

Heller B, Herre H, Lippoldt K, Loeffler M.

Stud Health Technol Inform. 2004;101:46-60.

PMID: 15537205 [PubMed - indexed for MEDLINE]

13:

The MGED Ontology: a resource for semantics-based description of microarray experiments.

Whetzel PL, Parkinson H, Causton HC, Fan L, Fostel J, Fragoso G, Game L, Heiskanen M, Morrison N, Rocca-Serra P, Sansone SA, Taylor C, White J, Stoeckert CJ Jr.

Bioinformatics. 2006 Apr 1;22(7):866-73. Epub 2006 Jan 21.

PMID: 16428806 [PubMed - indexed for MEDLINE]

14:

Chemical effects in biological systems--data dictionary (CEBS-DD): a compendium of terms for the capture and integration of biological study design description, conventional phenotypes, and 'omics data.

Fostel J, Choi D, Zwickl C, Morrison N, Rashid A, Hasan A, Bao W, Richard A, Tong W, Bushel PR, Brown R, Bruno M, Cunningham ML, Dix D, Eastin W, Frade C, Garcia A, Heinloth A, Irwin R, Madenspacher J, Merrick BA, Papoian T, Paules R, Rocca-Serra P, Sansone AS, Stevens J, Tomer K, Yang C, Waters M.

Toxicol Sci. 2005 Dec;88(2):585-601. Epub 2005 Sep 8.

PMID: 16150882 [PubMed - indexed for MEDLINE]

15:

Whole-plant growth stage ontology for angiosperms and its application in plant biology.

Pujar A, Jaiswal P, Kellogg EA, Ilic K, Vincent L, Avraham S, Stevens P, Zapata F, Reiser L, Rhee SY, Sachs MM, Schaeffer M, Stein L, Ware D, McCouch S.

Plant Physiol. 2006 Oct;142(2):414-28. Epub 2006 Aug 11.

PMID: 16905665 [PubMed - indexed for MEDLINE]

16:

The Sequence Ontology: a tool for the unification of genome annotations.

Eilbeck K, Lewis SE, Mungall CJ, Yandell M, Stein L, Durbin R, Ashburner M.

Genome Biol. 2005;6(5):R44. Epub 2005 Apr 29.

PMID: 15892872 [PubMed - indexed for MEDLINE]

17:

Terminological reference of a knowledge-based system: the data dictionary.

Stausberg J, Wormek A, Kraut U.

Medinfo. 1995;8 Pt 1:157-61.

PMID: 8591143 [PubMed - indexed for MEDLINE]

18:

GOurmet: a tool for quantitative comparison and visualization of gene expression profiles based on gene ontology (GO) distributions.

Doherty JM, Carmichael LK, Mills JC.

BMC Bioinformatics. 2006 Mar 17;7:151.

PMID: 16545118 [PubMed - indexed for MEDLINE]

19:

The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant.

Ilic K, Kellogg EA, Jaiswal P, Zapata F, Stevens PF, Vincent LP, Avraham S, Reiser L, Pujar A, Sachs MM, Whitman NT, McCouch SR, Schaeffer ML, Ware DH, Stein LD, Rhee SY.

Plant Physiol. 2007 Feb;143(2):587-99. Epub 2006 Dec 1.

PMID: 17142475 [PubMed - indexed for MEDLINE]

20:

Can we classify medical data dictionaries?

Bürkle T.

Stud Health Technol Inform. 2000;77:691-5.

PMID: 11187642 [PubMed - indexed for MEDLINE]

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