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Items 1 - 20 of 123
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1:

Creation and disruption of protein features by alternative splicing -- a novel mechanism to modulate function.

Hiller M, Huse K, Platzer M, Backofen R.

Genome Biol. 2005;6(7):R58. Epub 2005 Jun 22.

PMID: 15998447 [PubMed - indexed for MEDLINE]

2:

Non-EST based prediction of exon skipping and intron retention events using Pfam information.

Hiller M, Huse K, Platzer M, Backofen R.

Nucleic Acids Res. 2005 Oct 4;33(17):5611-21. Print 2005.

PMID: 16204458 [PubMed - indexed for MEDLINE]

3:

Systematic analysis of human kinase genes: a large number of genes and alternative splicing events result in functional and structural diversity.

Milanesi L, Petrillo M, Sepe L, Boccia A, D'Agostino N, Passamano M, Di Nardo S, Tasco G, Casadio R, Paolella G.

BMC Bioinformatics. 2005 Dec 1;6 Suppl 4:S20.

PMID: 16351747 [PubMed - indexed for MEDLINE]

4:

Splice variants: a homology modeling approach.

Furnham N, Ruffle S, Southan C.

Proteins. 2004 Feb 15;54(3):596-608.

PMID: 14748006 [PubMed - indexed for MEDLINE]

5:

Efficient prediction of alternative splice forms using protein domain homology.

Hiller M, Backofen R, Heymann S, Busch A, Glaesser TM, Freytag JC.

In Silico Biol. 2004;4(2):195-208.

PMID: 15107023 [PubMed - indexed for MEDLINE]

6:

Changes in alternative splicing of human and mouse genes are accompanied by faster evolution of constitutive exons.

Cusack BP, Wolfe KH.

Mol Biol Evol. 2005 Nov;22(11):2198-208. Epub 2005 Jul 27.

PMID: 16049198 [PubMed - indexed for MEDLINE]

7:

How prevalent is functional alternative splicing in the human genome?

Sorek R, Shamir R, Ast G.

Trends Genet. 2004 Feb;20(2):68-71. Review.

PMID: 14746986 [PubMed - indexed for MEDLINE]

8:

Non-EST-based prediction of novel alternatively spliced cassette exons with cell signaling function in Caenorhabditis elegans and human.

Leparc GG, Mitra RD.

Nucleic Acids Res. 2007;35(10):3192-202. Epub 2007 Apr 22.

PMID: 17452356 [PubMed - indexed for MEDLINE]

9:

Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomes.

Alekseyenko AV, Kim N, Lee CJ.

RNA. 2007 May;13(5):661-70. Epub 2007 Mar 16.

PMID: 17369312 [PubMed - indexed for MEDLINE]

10:

Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.

Gardina PJ, Clark TA, Shimada B, Staples MK, Yang Q, Veitch J, Schweitzer A, Awad T, Sugnet C, Dee S, Davies C, Williams A, Turpaz Y.

BMC Genomics. 2006 Dec 27;7:325.

PMID: 17192196 [PubMed - indexed for MEDLINE]

11:

Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56,419 completely sequenced and manually annotated full-length cDNAs.

Takeda J, Suzuki Y, Nakao M, Barrero RA, Koyanagi KO, Jin L, Motono C, Hata H, Isogai T, Nagai K, Otsuki T, Kuryshev V, Shionyu M, Yura K, Go M, Thierry-Mieg J, Thierry-Mieg D, Wiemann S, Nomura N, Sugano S, Gojobori T, Imanishi T.

Nucleic Acids Res. 2006;34(14):3917-28. Epub 2006 Aug 12.

PMID: 16914452 [PubMed - indexed for MEDLINE]

12:

SpliceInfo: an information repository for mRNA alternative splicing in human genome.

Huang HD, Horng JT, Lin FM, Chang YC, Huang CC.

Nucleic Acids Res. 2005 Jan 1;33(Database issue):D80-5.

PMID: 15608290 [PubMed - indexed for MEDLINE]

13:

A non-EST-based method for exon-skipping prediction.

Sorek R, Shemesh R, Cohen Y, Basechess O, Ast G, Shamir R.

Genome Res. 2004 Aug;14(8):1617-23.

PMID: 15289480 [PubMed - indexed for MEDLINE]

14:

Revised genomic structure of the human ghrelin gene and identification of novel exons, alternative splice variants and natural antisense transcripts.

Seim I, Collet C, Herington AC, Chopin LK.

BMC Genomics. 2007 Aug 30;8:298.

PMID: 17727735 [PubMed - indexed for MEDLINE]

15:

Alternative splicing of conserved exons is frequently species-specific in human and mouse.

Pan Q, Bakowski MA, Morris Q, Zhang W, Frey BJ, Hughes TR, Blencowe BJ.

Trends Genet. 2005 Feb;21(2):73-7.

PMID: 15661351 [PubMed - indexed for MEDLINE]

17:

The effects of multiple features of alternatively spliced exons on the K(A)/K(S) ratio test.

Chen FC, Chuang TJ.

BMC Bioinformatics. 2006 May 19;7:259.

PMID: 16709259 [PubMed - indexed for MEDLINE]

18:

Depolarization and CaM kinase IV modulate NMDA receptor splicing through two essential RNA elements.

Lee JA, Xing Y, Nguyen D, Xie J, Lee CJ, Black DL.

PLoS Biol. 2007 Feb;5(2):e40.

PMID: 17298178 [PubMed - indexed for MEDLINE]

19:

Evolutionarily conserved coupling of transcription and alternative splicing in the EPB41 (protein 4.1R) and EPB41L3 (protein 4.1B) genes.

Tan JS, Mohandas N, Conboy JG.

Genomics. 2005 Dec;86(6):701-7. Epub 2005 Oct 20.

PMID: 16242908 [PubMed - indexed for MEDLINE]

Items 1 - 20 of 123
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