9:
Mascot file parsing and quantification (MFPaQ), a new software to parse, validate, and quantify proteomics data generated by ICAT and SILAC mass spectrometric analyses: application to the proteomics study of membrane proteins from primary human endothelial cells.
Bouyssié D, Gonzalez de Peredo A, Mouton E, Albigot R, Roussel L, Ortega N, Cayrol C, Burlet-Schiltz O, Girard JP, Monsarrat B.
Mol Cell Proteomics. 2007 Sep;6(9):1621-37. Epub 2007 May 28.
PMID: 17533220 [PubMed - indexed for MEDLINE]
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Making broad proteome protein measurements in 1-5 min using high-speed RPLC separations and high-accuracy mass measurements.
Shen Y, Strittmatter EF, Zhang R, Metz TO, Moore RJ, Li F, Udseth HR, Smith RD, Unger KK, Kumar D, Lubda D.
Anal Chem. 2005 Dec 1;77(23):7763-73.
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