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1:

Characterization and modeling of the Haemophilus influenzae core and supragenomes based on the complete genomic sequences of Rd and 12 clinical nontypeable strains.

Hogg JS, Hu FZ, Janto B, Boissy R, Hayes J, Keefe R, Post JC, Ehrlich GD.

Genome Biol. 2007;8(6):R103.

PMID: 17550610 [PubMed - indexed for MEDLINE]

2:

Identification, distribution, and expression of novel genes in 10 clinical isolates of nontypeable Haemophilus influenzae.

Shen K, Antalis P, Gladitz J, Sayeed S, Ahmed A, Yu S, Hayes J, Johnson S, Dice B, Dopico R, Keefe R, Janto B, Chong W, Goodwin J, Wadowsky RM, Erdos G, Post JC, Ehrlich GD, Hu FZ.

Infect Immun. 2005 Jun;73(6):3479-91.

PMID: 15908377 [PubMed - indexed for MEDLINE]

3:

Virulence phenotypes of low-passage clinical isolates of nontypeable Haemophilus influenzae assessed using the chinchilla laniger model of otitis media.

Buchinsky FJ, Forbes ML, Hayes JD, Shen K, Ezzo S, Compliment J, Hogg J, Hiller NL, Hu FZ, Post JC, Ehrlich GD.

BMC Microbiol. 2007 Jun 14;7:56.

PMID: 17570853 [PubMed - indexed for MEDLINE]

4:

Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome.

Hiller NL, Janto B, Hogg JS, Boissy R, Yu S, Powell E, Keefe R, Ehrlich NE, Shen K, Hayes J, Barbadora K, Klimke W, Dernovoy D, Tatusova T, Parkhill J, Bentley SD, Post JC, Ehrlich GD, Hu FZ.

J Bacteriol. 2007 Nov;189(22):8186-95. Epub 2007 Aug 3.

PMID: 17675389 [PubMed - indexed for MEDLINE]

5:

Partial analysis of the genomes of two nontypeable Haemophilus influenzae otitis media isolates.

Munson RS Jr, Harrison A, Gillaspy A, Ray WC, Carson M, Armbruster D, Gipson J, Gipson M, Johnson L, Lewis L, Dyer DW, Bakaletz LO.

Infect Immun. 2004 May;72(5):3002-10.

PMID: 15102813 [PubMed - indexed for MEDLINE]

6:

Development and characterization of a pooled Haemophilus influenzae genomic library for the evaluation of gene expression changes associated with mucosal biofilm formation in otitis media.

Erdos G, Sayeed S, Antalis P, Hu FZ, Hayes J, Goodwin J, Dopico R, Post JC, Ehrlich GD.

Int J Pediatr Otorhinolaryngol. 2003 Jul;67(7):749-55.

PMID: 12791450 [PubMed - indexed for MEDLINE]

7:

Genomic sequence of an otitis media isolate of nontypeable Haemophilus influenzae: comparative study with H. influenzae serotype d, strain KW20.

Harrison A, Dyer DW, Gillaspy A, Ray WC, Mungur R, Carson MB, Zhong H, Gipson J, Gipson M, Johnson LS, Lewis L, Bakaletz LO, Munson RS Jr.

J Bacteriol. 2005 Jul;187(13):4627-36.

PMID: 15968074 [PubMed - indexed for MEDLINE]

8:

Nontypeable Haemophilus influenzae meningitis in children: phenotypic and genotypic characterization of isolates.

Cardines R, Giufrè M, Mastrantonio P, Ciofi degli Atti ML, Cerquetti M.

Pediatr Infect Dis J. 2007 Jul;26(7):577-82.

PMID: 17596797 [PubMed - indexed for MEDLINE]

9:

Prevalence and distribution of the hmw and hia genes and the HMW and Hia adhesins among genetically diverse strains of nontypeable Haemophilus influenzae.

St Geme JW 3rd, Kumar VV, Cutter D, Barenkamp SJ.

Infect Immun. 1998 Jan;66(1):364-8.

PMID: 9423882 [PubMed - indexed for MEDLINE]

10:

Extensive genomic plasticity in Pseudomonas aeruginosa revealed by identification and distribution studies of novel genes among clinical isolates.

Shen K, Sayeed S, Antalis P, Gladitz J, Ahmed A, Dice B, Janto B, Dopico R, Keefe R, Hayes J, Johnson S, Yu S, Ehrlich N, Jocz J, Kropp L, Wong R, Wadowsky RM, Slifkin M, Preston RA, Erdos G, Post JC, Ehrlich GD, Hu FZ.

Infect Immun. 2006 Sep;74(9):5272-83.

PMID: 16926421 [PubMed - indexed for MEDLINE]

11:

Analysis of genetic relatedness of Haemophilus influenzae isolates by multilocus sequence typing.

Erwin AL, Sandstedt SA, Bonthuis PJ, Geelhood JL, Nelson KL, Unrath WC, Diggle MA, Theodore MJ, Pleatman CR, Mothershed EA, Sacchi CT, Mayer LW, Gilsdorf JR, Smith AL.

J Bacteriol. 2008 Feb;190(4):1473-83. Epub 2007 Dec 7.

PMID: 18065541 [PubMed - indexed for MEDLINE]

13:

Identification of new genetic regions more prevalent in nontypeable Haemophilus influenzae otitis media strains than in throat strains.

Xie J, Juliao PC, Gilsdorf JR, Ghosh D, Patel M, Marrs CF.

J Clin Microbiol. 2006 Dec;44(12):4316-25. Epub 2006 Sep 27.

PMID: 17005745 [PubMed - indexed for MEDLINE]

14:

Intra- and interstrain differences of virulence among nontypeable Haemophilus influenzae strains.

Melhus A, Hermansson A, Forsgren A, Prellner K.

APMIS. 1998 Sep;106(9):858-68.

PMID: 9808412 [PubMed - indexed for MEDLINE]

15:

Differential genome contents of nontypeable Haemophilus influenzae strains from adults with chronic obstructive pulmonary disease.

Fernaays MM, Lesse AJ, Sethi S, Cai X, Murphy TF.

Infect Immun. 2006 Jun;74(6):3366-74.

PMID: 16714566 [PubMed - indexed for MEDLINE]

16:

Codon usage comparison of novel genes in clinical isolates of Haemophilus influenzae.

Gladitz J, Shen K, Antalis P, Hu FZ, Post JC, Ehrlich GD.

Nucleic Acids Res. 2005 Jun 27;33(11):3644-58. Print 2005.

PMID: 15983137 [PubMed - indexed for MEDLINE]

17:

Analysis of the genome-wide variations among multiple strains of the plant pathogenic bacterium Xylella fastidiosa.

Doddapaneni H, Yao J, Lin H, Walker MA, Civerolo EL.

BMC Genomics. 2006 Sep 1;7:225.

PMID: 16948851 [PubMed - indexed for MEDLINE]

18:

Use of the complete genome sequence information of Haemophilus influenzae strain Rd to investigate lipopolysaccharide biosynthesis.

Hood DW, Deadman ME, Allen T, Masoud H, Martin A, Brisson JR, Fleischmann R, Venter JC, Richards JC, Moxon ER.

Mol Microbiol. 1996 Dec;22(5):951-65.

PMID: 8971716 [PubMed - indexed for MEDLINE]

19:

[Study on genetic diversity of genes encoding main adhesins among nontypeable Haemophilus influenzae strains isolated from children in Poland]

Augustynowicz E, Szenborn L, Samet A, Banyś D, Sledzińska A, Gzyl A, Rybak B, Nowaczek A, Slusarczyk J.

Med Dosw Mikrobiol. 2006;58(4):291-301. Polish.

PMID: 17642307 [PubMed - indexed for MEDLINE]

20:

Conservation and diversity of HMW1 and HMW2 adhesin binding domains among invasive nontypeable Haemophilus influenzae isolates.

Giufrè M, Muscillo M, Spigaglia P, Cardines R, Mastrantonio P, Cerquetti M.

Infect Immun. 2006 Feb;74(2):1161-70.

PMID: 16428765 [PubMed - indexed for MEDLINE]

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