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Items 1 - 20 of 100
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1:

The Opossum genome reveals further evidence for regulatory evolution in mammalian diversification.

Lemos B.

Genome Biol. 2007;8(8):223. Review.

PMID: 17688679 [PubMed - indexed for MEDLINE]

2:

Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences.

Mikkelsen TS, Wakefield MJ, Aken B, Amemiya CT, Chang JL, Duke S, Garber M, Gentles AJ, Goodstadt L, Heger A, Jurka J, Kamal M, Mauceli E, Searle SM, Sharpe T, Baker ML, Batzer MA, Benos PV, Belov K, Clamp M, Cook A, Cuff J, Das R, Davidow L, Deakin JE, Fazzari MJ, Glass JL, Grabherr M, Greally JM, Gu W, Hore TA, Huttley GA, Kleber M, Jirtle RL, Koina E, Lee JT, Mahony S, Marra MA, Miller RD, Nicholls RD, Oda M, Papenfuss AT, Parra ZE, Pollock DD, Ray DA, Schein JE, Speed TP, Thompson K, VandeBerg JL, Wade CM, Walker JA, Waters PD, Webber C, Weidman JR, Xie X, Zody MC; Broad Institute Genome Sequencing Platform; Broad Institute Whole Genome Assembly Team, Graves JA, Ponting CP, Breen M, Samollow PB, Lander ES, Lindblad-Toh K.

Nature. 2007 May 10;447(7141):167-77.

PMID: 17495919 [PubMed - indexed for MEDLINE]

3:

Evolutionary dynamics of transposable elements in the short-tailed opossum Monodelphis domestica.

Gentles AJ, Wakefield MJ, Kohany O, Gu W, Batzer MA, Pollock DD, Jurka J.

Genome Res. 2007 Jul;17(7):992-1004. Epub 2007 May 10.

PMID: 17495012 [PubMed - indexed for MEDLINE]

4:

Characterization of the opossum immune genome provides insights into the evolution of the mammalian immune system.

Belov K, Sanderson CE, Deakin JE, Wong ES, Assange D, McColl KA, Gout A, de Bono B, Barrow AD, Speed TP, Trowsdale J, Papenfuss AT.

Genome Res. 2007 Jul;17(7):982-91. Epub 2007 May 10.

PMID: 17495011 [PubMed - indexed for MEDLINE]

5:

The search for a marsupial XIC reveals a break with vertebrate synteny.

Davidow LS, Breen M, Duke SE, Samollow PB, McCarrey JR, Lee JT.

Chromosome Res. 2007;15(2):137-46. Epub 2007 Mar 5.

PMID: 17333538 [PubMed - indexed for MEDLINE]

6:

Evolution of mammalian CD1: marsupial CD1 is not orthologous to the eutherian isoforms and is a pseudogene in the opossum Monodelphis domestica.

Baker ML, Miller RD.

Immunology. 2007 May;121(1):113-21. Epub 2007 Jan 18.

PMID: 17244156 [PubMed - indexed for MEDLINE]

7:

Comparative genomic analysis and evolution of the T cell receptor loci in the opossum Monodelphis domestica.

Parra ZE, Baker ML, Hathaway J, Lopez AM, Trujillo J, Sharp A, Miller RD.

BMC Genomics. 2008 Feb 29;9:111.

PMID: 18312668 [PubMed - indexed for MEDLINE]

8:

Molecular characterisation and expression of CD4 in two distantly related marsupials: the gray short-tailed opossum (Monodelphis domestica) and tammar wallaby (Macropus eugenii).

Duncan LG, Nair SV, Deane EM.

Mol Immunol. 2007 Jul;44(15):3641-52. Epub 2007 May 22.

PMID: 17521733 [PubMed - indexed for MEDLINE]

9:

In vitro and in silico annotation of conserved and nonconserved microRNAs in the genome of the marsupial Monodelphis domestica.

Devor EJ, Samollow PB.

J Hered. 2008 Jan-Feb;99(1):66-72. Epub 2007 Oct 26.

PMID: 17965199 [PubMed - indexed for MEDLINE]

10:

Reconstructing an ancestral mammalian immune supercomplex from a marsupial major histocompatibility complex.

Belov K, Deakin JE, Papenfuss AT, Baker ML, Melman SD, Siddle HV, Gouin N, Goode DL, Sargeant TJ, Robinson MD, Wakefield MJ, Mahony S, Cross JG, Benos PV, Samollow PB, Speed TP, Graves JA, Miller RD.

PLoS Biol. 2006 Mar;4(3):e46. Epub 2006 Jan 31.

PMID: 16435885 [PubMed - indexed for MEDLINE]

11:

The opossum genome: insights and opportunities from an alternative mammal.

Samollow PB.

Genome Res. 2008 Aug;18(8):1199-215. Review.

PMID: 18676819 [PubMed - indexed for MEDLINE]

12:

An analysis of the gene complement of a marsupial, Monodelphis domestica: evolution of lineage-specific genes and giant chromosomes.

Goodstadt L, Heger A, Webber C, Ponting CP.

Genome Res. 2007 Jul;17(7):969-81. Epub 2007 May 10.

PMID: 17495010 [PubMed - indexed for MEDLINE]

13:

The genome of a Gondwanan mammal.

Renfree MB.

Bioessays. 2007 Nov;29(11):1073-6.

PMID: 17935149 [PubMed - indexed for MEDLINE]

14:

Regulatory conservation of protein coding and microRNA genes in vertebrates: lessons from the opossum genome.

Mahony S, Corcoran DL, Feingold E, Benos PV.

Genome Biol. 2007;8(5):R84.

PMID: 17506886 [PubMed - indexed for MEDLINE]

15:

Analysis of a set of Australian northern brown bandicoot expressed sequence tags with comparison to the genome sequence of the South American grey short tailed opossum.

Baker ML, Indiviglio S, Nyberg AM, Rosenberg GH, Lindblad-Toh K, Miller RD, Papenfuss AT.

BMC Genomics. 2007 Feb 13;8:50.

PMID: 17298671 [PubMed - indexed for MEDLINE]

16:

SINEs, evolution and genome structure in the opossum.

Gu W, Ray DA, Walker JA, Barnes EW, Gentles AJ, Samollow PB, Jurka J, Batzer MA, Pollock DD.

Gene. 2007 Jul 1;396(1):46-58. Epub 2007 Mar 19.

PMID: 17442506 [PubMed - indexed for MEDLINE]

17:

Into the heart of darkness: large-scale clustering of human non-coding DNA.

Bejerano G, Haussler D, Blanchette M.

Bioinformatics. 2004 Aug 4;20 Suppl 1:i40-8.

PMID: 15262779 [PubMed - indexed for MEDLINE]

18:

Integrated cytogenetic BAC map of the genome of the gray, short-tailed opossum, Monodelphis domestica.

Duke SE, Samollow PB, Mauceli E, Lindblad-Toh K, Breen M.

Chromosome Res. 2007;15(3):361-70. Epub 2007 May 10.

PMID: 17406991 [PubMed - indexed for MEDLINE]

20:

A microsatellite-based, physically anchored linkage map for the gray, short-tailed opossum (Monodelphis domestica).

Samollow PB, Gouin N, Miethke P, Mahaney SM, Kenney M, VandeBerg JL, Graves JA, Kammerer CM.

Chromosome Res. 2007;15(3):269-81. Epub 2007 May 10.

PMID: 17333535 [PubMed - indexed for MEDLINE]

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