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Items 1 - 20 of 101
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1:

Molecular signature of hypersaline adaptation: insights from genome and proteome composition of halophilic prokaryotes.

Paul S, Bag SK, Das S, Harvill ET, Dutta C.

Genome Biol. 2008 Apr 9;9(4):R70. [Epub ahead of print]

PMID: 18397532 [PubMed - as supplied by publisher]

2:

Analysis of Nanoarchaeum equitans genome and proteome composition: indications for hyperthermophilic and parasitic adaptation.

Das S, Paul S, Bag SK, Dutta C.

BMC Genomics. 2006 Jul 25;7:186.

PMID: 16869956 [PubMed - indexed for MEDLINE]

3:

Low-pass sequencing for microbial comparative genomics.

Goo YA, Roach J, Glusman G, Baliga NS, Deutsch K, Pan M, Kennedy S, DasSarma S, Ng WV, Hood L.

BMC Genomics. 2004 Jan 12;5(1):3.

PMID: 14718067 [PubMed - indexed for MEDLINE]

4:

Microbial life at high salt concentrations: phylogenetic and metabolic diversity.

Oren A.

Saline Systems. 2008 Apr 15;4:2.

PMID: 18412960 [PubMed - in process]

5:

Understanding the adaptation of Halobacterium species NRC-1 to its extreme environment through computational analysis of its genome sequence.

Kennedy SP, Ng WV, Salzberg SL, Hood L, DasSarma S.

Genome Res. 2001 Oct;11(10):1641-50.

PMID: 11591641 [PubMed - indexed for MEDLINE]

6:

Evolutionary divergence and salinity-mediated selection in halophilic archaea.

Dennis PP, Shimmin LC.

Microbiol Mol Biol Rev. 1997 Mar;61(1):90-104. Review.

PMID: 9106366 [PubMed - indexed for MEDLINE]

7:

Quantifying the species-specificity in genomic signatures, synonymous codon choice, amino acid usage and G+C content.

Sandberg R, Bränden CI, Ernberg I, Cöster J.

Gene. 2003 Jun 5;311:35-42.

PMID: 12853136 [PubMed - indexed for MEDLINE]

8:

Unique amino acid composition of proteins in halophilic bacteria.

Fukuchi S, Yoshimune K, Wakayama M, Moriguchi M, Nishikawa K.

J Mol Biol. 2003 Mar 21;327(2):347-57.

PMID: 12628242 [PubMed - indexed for MEDLINE]

9:

Protein and DNA sequence determinants of thermophilic adaptation.

Zeldovich KB, Berezovsky IN, Shakhnovich EI.

PLoS Comput Biol. 2007 Jan 12;3(1):e5. Epub 2006 Nov 30.

PMID: 17222055 [PubMed - indexed for MEDLINE]

10:

Adaptive modifications in membranes of halotolerant and halophilic microorganisms.

Russell NJ.

J Bioenerg Biomembr. 1989 Feb;21(1):93-113. Review.

PMID: 2651429 [PubMed - indexed for MEDLINE]

11:

Evolution of proteomes: fundamental signatures and global trends in amino acid compositions.

Tekaia F, Yeramian E.

BMC Genomics. 2006 Dec 5;7:307.

PMID: 17147802 [PubMed - indexed for MEDLINE]

12:

High guanine-cytosine content is not an adaptation to high temperature: a comparative analysis amongst prokaryotes.

Hurst LD, Merchant AR.

Proc Biol Sci. 2001 Mar 7;268(1466):493-7.

PMID: 11296861 [PubMed - indexed for MEDLINE]

13:

Amino acid composition of genomes, lifestyles of organisms, and evolutionary trends: a global picture with correspondence analysis.

Tekaia F, Yeramian E, Dujon B.

Gene. 2002 Sep 4;297(1-2):51-60.

PMID: 12384285 [PubMed - indexed for MEDLINE]

14:

Thermophilic prokaryotes have characteristic patterns of codon usage, amino acid composition and nucleotide content.

Singer GA, Hickey DA.

Gene. 2003 Oct 23;317(1-2):39-47.

PMID: 14604790 [PubMed - indexed for MEDLINE]

15:

Simple sequence proteins in prokaryotic proteomes.

Subramanyam MB, Gnanamani M, Ramachandran S.

BMC Genomics. 2006 Jun 8;7:141.

PMID: 16762057 [PubMed - indexed for MEDLINE]

16:

Diversity of halophilic microorganisms: environments, phylogeny, physiology, and applications.

Oren A.

J Ind Microbiol Biotechnol. 2002 Jan;28(1):56-63.

PMID: 11938472 [PubMed - indexed for MEDLINE]

17:

Electrostatic contributions to the stability of halophilic proteins.

Elcock AH, McCammon JA.

J Mol Biol. 1998 Jul 24;280(4):731-48.

PMID: 9677300 [PubMed - indexed for MEDLINE]

18:

A simple model based on mutation and selection explains trends in codon and amino-acid usage and GC composition within and across genomes.

Knight RD, Freeland SJ, Landweber LF.

Genome Biol. 2001;2(4):RESEARCH0010. Epub 2001 Mar 22.

PMID: 11305938 [PubMed - indexed for MEDLINE]

19:

Distinctive features of large complex virus genomes and proteomes.

Mrázek J, Karlin S.

Proc Natl Acad Sci U S A. 2007 Mar 20;104(12):5127-32. Epub 2007 Mar 9.

PMID: 17360339 [PubMed - indexed for MEDLINE]

20:

Haloadaptation: insights from comparative modeling studies of halophilic archaeal DHFRs.

Kastritis PL, Papandreou NC, Hamodrakas SJ.

Int J Biol Macromol. 2007 Oct 1;41(4):447-53. Epub 2007 Jun 19.

PMID: 17675150 [PubMed - indexed for MEDLINE]

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