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Items 1 - 20 of 101
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1:

Analysis of gene expression in a developmental context emphasizes distinct biological leitmotifs in human cancers.

Naxerova K, Bult CJ, Peaston A, Fancher K, Knowles BB, Kasif S, Kohane IS.

Genome Biol. 2008;9(7):R108. Epub 2008 Jul 8.

PMID: 18611264 [PubMed - indexed for MEDLINE]

2:

Non-small-cell lung cancer molecular signatures recapitulate lung developmental pathways.

Borczuk AC, Gorenstein L, Walter KL, Assaad AA, Wang L, Powell CA.

Am J Pathol. 2003 Nov;163(5):1949-60.

PMID: 14578194 [PubMed - indexed for MEDLINE]

3:

Molecular profiling of mouse lung tumors: association with tumor progression, lung development, and human lung adenocarcinomas.

Bonner AE, Lemon WJ, Devereux TR, Lubet RA, You M.

Oncogene. 2004 Feb 5;23(5):1166-76.

PMID: 14647414 [PubMed - indexed for MEDLINE]

4:

Predicting survival within the lung cancer histopathological hierarchy using a multi-scale genomic model of development.

Liu H, Kho AT, Kohane IS, Sun Y.

PLoS Med. 2006 Jul;3(7):e232.

PMID: 16800721 [PubMed - indexed for MEDLINE]

5:

Transcriptional recapitulation and subversion of embryonic colon development by mouse colon tumor models and human colon cancer.

Kaiser S, Park YK, Franklin JL, Halberg RB, Yu M, Jessen WJ, Freudenberg J, Chen X, Haigis K, Jegga AG, Kong S, Sakthivel B, Xu H, Reichling T, Azhar M, Boivin GP, Roberts RB, Bissahoyo AC, Gonzales F, Bloom GC, Eschrich S, Carter SL, Aronow JE, Kleimeyer J, Kleimeyer M, Ramaswamy V, Settle SH, Boone B, Levy S, Graff JM, Doetschman T, Groden J, Dove WF, Threadgill DW, Yeatman TJ, Coffey RJ Jr, Aronow BJ.

Genome Biol. 2007;8(7):R131.

PMID: 17615082 [PubMed - indexed for MEDLINE]

6:

A biphasic pattern of gene expression during mouse retina development.

Zhang SS, Xu X, Liu MG, Zhao H, Soares MB, Barnstable CJ, Fu XY.

BMC Dev Biol. 2006 Oct 17;6:48.

PMID: 17044933 [PubMed - indexed for MEDLINE]

7:

Distinct molecular mechanisms underlying clinically relevant subtypes of breast cancer: gene expression analyses across three different platforms.

Sørlie T, Wang Y, Xiao C, Johnsen H, Naume B, Samaha RR, Børresen-Dale AL.

BMC Genomics. 2006 May 26;7:127.

PMID: 16729877 [PubMed - indexed for MEDLINE]

8:

Conserved mechanisms across development and tumorigenesis revealed by a mouse development perspective of human cancers.

Kho AT, Zhao Q, Cai Z, Butte AJ, Kim JY, Pomeroy SL, Rowitch DH, Kohane IS.

Genes Dev. 2004 Mar 15;18(6):629-40.

PMID: 15075291 [PubMed - indexed for MEDLINE]

9:

Insights into developmental mechanisms and cancers in the mammalian intestine derived from serial analysis of gene expression and study of the hepatoma-derived growth factor (HDGF).

Lepourcelet M, Tou L, Cai L, Sawada J, Lazar AJ, Glickman JN, Williamson JA, Everett AD, Redston M, Fox EA, Nakatani Y, Shivdasani RA.

Development. 2005 Jan;132(2):415-27. Epub 2004 Dec 16.

PMID: 15604097 [PubMed - indexed for MEDLINE]

10:

Establishment of the epithelial-specific transcriptome of normal and malignant human breast cells based on MPSS and array expression data.

Grigoriadis A, Mackay A, Reis-Filho JS, Steele D, Iseli C, Stevenson BJ, Jongeneel CV, Valgeirsson H, Fenwick K, Iravani M, Leao M, Simpson AJ, Strausberg RL, Jat PS, Ashworth A, Neville AM, O'Hare MJ.

Breast Cancer Res. 2006;8(5):R56.

PMID: 17014703 [PubMed - indexed for MEDLINE]

11:

Transcriptomic and metabolite analyses of Cabernet Sauvignon grape berry development.

Deluc LG, Grimplet J, Wheatley MD, Tillett RL, Quilici DR, Osborne C, Schooley DA, Schlauch KA, Cushman JC, Cramer GR.

BMC Genomics. 2007 Nov 22;8:429.

PMID: 18034876 [PubMed - indexed for MEDLINE]

12:

In silico comparison of gene expression levels in ten human tumor types reveals candidate genes associated with carcinogenesis.

Chen S, Zhu B, Yu L.

Cytogenet Genome Res. 2006;112(1-2):53-9.

PMID: 16276090 [PubMed - indexed for MEDLINE]

13:

Gene expression analysis of immune-mediated arrest of tumorigenesis in a transgenic mouse model of HER-2/neu-positive basal-like mammary carcinoma.

Astolfi A, Landuzzi L, Nicoletti G, De Giovanni C, Croci S, Palladini A, Ferrini S, Iezzi M, Musiani P, Cavallo F, Forni G, Nanni P, Lollini PL.

Am J Pathol. 2005 Apr;166(4):1205-16.

PMID: 15793299 [PubMed - indexed for MEDLINE]

14:

Gene expression signatures identify novel regulatory pathways during murine lung development: implications for lung tumorigenesis.

Bonner AE, Lemon WJ, You M.

J Med Genet. 2003 Jun;40(6):408-17.

PMID: 12807961 [PubMed - indexed for MEDLINE]

15:

Overlapping gene expression in fetal mouse intestine development and human colorectal cancer.

Hu M, Shivdasani RA.

Cancer Res. 2005 Oct 1;65(19):8715-22.

PMID: 16204040 [PubMed - indexed for MEDLINE]

16:

Gene signature-based prediction of tumor response to cyclophosphamide.

Korrat A, Greiner T, Maurer M, Metz T, Fiebig HH.

Cancer Genomics Proteomics. 2007 May-Jun;4(3):187-95. Erratum in: Cancer Genomics Proteomics. 2007 Sep-Oct;4(5):373-5.

PMID: 17878522 [PubMed - indexed for MEDLINE]

17:

Profiling of pathway-specific changes in gene expression following growth of human cancer cell lines transplanted into mice.

Creighton C, Kuick R, Misek DE, Rickman DS, Brichory FM, Rouillard JM, Omenn GS, Hanash S.

Genome Biol. 2003;4(7):R46. Epub 2003 Jun 23.

PMID: 12844362 [PubMed - indexed for MEDLINE]

18:

Oncogenic pathway signatures in human cancers as a guide to targeted therapies.

Bild AH, Yao G, Chang JT, Wang Q, Potti A, Chasse D, Joshi MB, Harpole D, Lancaster JM, Berchuck A, Olson JA Jr, Marks JR, Dressman HK, West M, Nevins JR.

Nature. 2006 Jan 19;439(7074):353-7. Epub 2005 Nov 6.

PMID: 16273092 [PubMed - indexed for MEDLINE]

19:

Differences in gene expression in prostate cancer, normal appearing prostate tissue adjacent to cancer and prostate tissue from cancer free organ donors.

Chandran UR, Dhir R, Ma C, Michalopoulos G, Becich M, Gilbertson J.

BMC Cancer. 2005 May 13;5:45.

PMID: 15892885 [PubMed - indexed for MEDLINE]

20:

Common human cancer genes discovered by integrated gene-expression analysis.

Lu Y, Yi Y, Liu P, Wen W, James M, Wang D, You M.

PLoS ONE. 2007 Nov 7;2(11):e1149.

PMID: 17989776 [PubMed - indexed for MEDLINE]

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