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.refereed research


Genome Biology aims to provide the best possible service to authors and readers of primary research articles. The refereed research section publishes peer-reviewed research in all areas of molecular, cellular, organismal and population biology that are informed by genomics. All research articles are made available free to individuals through the web, and there are no restrictions on article length or on the types of information that can be included. The publication schedule is very fast, using electronic systems for article delivery, proofing and peer-review. For more details about how refereed research is published in Genome Biology and for instructions for authors, see 'about refereed research'.
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Refereed research
The editor's selection of the most interesting refereed research published recently in Genome Biology.

Motifs and cis-regulatory modules mediating the expression of genes co-expressed in presynaptic neurons

Research    
Rui Liu, Sridhar Hannenhalli, Maja Bucan
(1 July 2009)

An integrative strategy of comparative genomics, experimental and computational approaches reveals aspects of a regulatory network controlling neuronal-specific expression in presynaptic neurons.

[Abstract] [Provisional PDF]

Genomic linkage map of the human blood fluke Schistosoma mansoni

Research    
Charles D Criscione, Claudia LL Valentim, Hirohisa Hirai, Philip T LoVerde, Timothy JC Anderson
(30 June 2009)

The first genetic linkage map of Schistosoma mansoni reveals insights into higher female recombination, confirms ZW inheritance patterns and recombination hotspots.

[Abstract] [Provisional PDF]

Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea

Research    
Yvan Zivanovic, Jean Armengaud, Arnaud Lagorce, Christophe Leplat, Philippe Guerin, Murielle Dutertre, Veronique Anthouard, Patrick Forterre, Patrick Wincker, Fabrice Confalonieri
(26 June 2009)

The genome sequence of Thermococcus gammatolerans, a radioresistant archaeon, is described; a proteomic analysis reveals that radioresistance may be due to unknown DNA repair enzymes.

[Abstract] [Provisional PDF] [PubMed] [Related articles]

iBsu1103: a new genome-scale metabolic model of Bacillus subtilis based on SEED annotations

Research    
Christopher S Henry, Jenifer F Zinner, Matthew P Cohoon, Rick L Stevens
(25 June 2009)

A new and validated genome-scale metabolic model of Bacillus subtilis 168, iBsu1103, is presented that has significantly improved completeness and accuracy.

[Abstract] [Provisional PDF] [PubMed] [Related articles]

Comparative genomic analysis of C4 photosynthetic pathway evolution in grasses

Research    
Xiyin Wang, Udo Gowik, Haibao Tang, John E Bowers, Peter Westhoff, Andrew H Paterson
(23 June 2009)

Comparison of the sorghum, maize and rice genomes shows that gene duplication and functional innovation is common to evolution of most but not all genes in the C4 photosynthetic pathway.

[Abstract] [Provisional PDF] [PubMed] [Related articles]

Insights into female sperm storage from the spermathecal fluid proteome of the honeybee Apis mellifera

Research    
Boris Baer, Holger Eubel, Nicolas L Taylor, Nicholas O'Toole, A Harvey Millar
(18 June 2009)

A proteomic and metabolic network analysis of honeybee queen spermathecal fluid provides insights into female long-term sperm storage mechanisms.

[Abstract] [Provisional PDF] [PubMed] [Related articles]

Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress

Research    
Simon M Dittami, Delphine Scornet, Jean-Louis Petit, Beatrice Segurens, Corinne Da Silva, Erwan Corre, Michael Dondrup, Karl-Heinz Glatting, Rainer Konig, Lieven Sterck, Pierre Rouze, Yves Van de Peer, J Mark Cock, Catherine Boyen, Thierry Tonon
(16 June 2009)

The brown alga Ectocarpus siliculosus, unlike terrestrial plants, undergoes extensive reprogramming of its transcriptome during the acclimation to mild abiotic stress.

[Abstract] [Provisional PDF] [PubMed] [Related articles]

A hidden reservoir of integrative elements is the major source of recently acquired foreign genes and ORFans in archaeal and bacterial genomes

Research    
Diego Cortez, Patrick Forterre, Simonetta Gribaldo
(16 June 2009)

A large-scale survey of potential recently acquired integrative elements in 119 archaeal and bacterial genomes reveals that many recently acquired genes have originated from integrative elements

[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Additional refereed research articles from Genome Biology. For a complete listing choose 'list all' from the menu to the left.





























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