Genome Biology | Articles which cite: Celsius: a community resource for Affymetrix microarray data.

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Methodology article

Construction and use of gene expression covariation matrix
Hennetin J, Pehkonen P, Bellis M
BMC Bioinformatics 2009, 10: 214

(13 July 2009)

Database

SiPaGene: A new repository for instant online retrieval, sharing and meta-analyses of GeneChip^®expression data
Menßen A, Edinger G, Grün JR, Haase U, Baumgrass R, Grützkau A, Radbruch A, Burmester GR, Häupl T
BMC Genomics 2009, 10: 98

(5 March 2009)

Research

Comparison of Affymetrix data normalization methods using 6,926 experiments across five array generations
Autio R, Kilpinen S, Saarela M, Kallioniemi O, Hautaniemi S, Astola J
BMC Bioinformatics 2009, 10(Suppl 1):S24 (30 January 2009)
[Abstract] [Full text] [PDF] [PubMed] [Related articles]

Software

EMAAS: An extensible grid-based Rich Internet Application for microarray data analysis and management
Barton G, Abbott J, Chiba N, Huang DW, Huang Y, Krznaric M, Mack-Smith J, Saleem A, Sherman BT, Tiwari B, Tomlinson C, Aitman T, Darlington J, Game L, Sternberg MJE, Butcher SA
BMC Bioinformatics 2008, 9: 493

(25 November 2008)

Method

Boolean implication networks derived from large scale, whole genome microarray datasets
Sahoo D, Dill DL, Gentles AJ, Tibshirani R, Plevritis SK
Genome Biology 2008, 9(10):R157

(30 October 2008)

Research article

Gene expression analysis of glioblastomas identifies the major molecular basis for the prognostic benefit of younger age
Lee Y, Scheck AC, Cloughesy TF, Lai A, Dong J, Farooqi HK, Liau LM, Horvath S, Mischel PS, Nelson SF
BMC Medical Genomics 2008, 1: 52

(21 October 2008)

Method

Systematic bioinformatic analysis of expression levels of 17,330 human genes across 9,783 samples from 175 types of healthy and pathological tissues
Kilpinen S, Autio R, Ojala K, Iljin K, Bucher E, Sara H, Pisto T, Saarela M, Skotheim RI, Björkman M, Mpindi JP, Haapa-Paananen S, Vainio P, Edgren H, Wolf M, Astola J, Nees M, Hautaniemi S, Kallioniemi O
Genome Biology 2008, 9(9):R139

(19 September 2008)

Database

MiMiR an integrated platform for microarray data sharing, mining and analysis
Tomlinson C, Thimma M, Alexandrakis S, Castillo T, Dennis JL, Brooks A, Bradley T, Turnbull C, Blaveri E, Barton G, Chiba N, Maratou K, Soutter P, Aitman T, Game L
BMC Bioinformatics 2008, 9: 379

(18 September 2008)

Research

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