Articles
Volume 12 Supplement 1
Beyond the Genome 2011
Meeting abstracts
Beyond the Genome 2011
Washington, DC, USA
19-22 September 2011
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Invited speaker presentation
Joshua Akey Genome Biology 2011, 12(Suppl 1):I1 (19 September 2011) |
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Invited speaker presentation
Abstract not submitted for online publication Genome Biology 2011, 12(Suppl 1):I2 (19 September 2011) |
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Invited speaker presentation
Are clinical genomes already becoming semi-routine for patient care? Mark Boguski Genome Biology 2011, 12(Suppl 1):I3 (19 September 2011) |
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Invited speaker presentation
Interrogating the architecture of cancer genomes Peter Campbell Genome Biology 2011, 12(Suppl 1):I4 (19 September 2011) |
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Invited speaker presentation
Genome-forward oncology: how do we get there? Matthew Ellis Genome Biology 2011, 12(Suppl 1):I5 (19 September 2011) |
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Invited speaker presentation
Abstract not submitted for online publication Genome Biology 2011, 12(Suppl 1):I6 (19 September 2011) |
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Invited speaker presentation
Microbial reference genomes for human metagenomics Sarah K Highlander Genome Biology 2011, 12(Suppl 1):I7 (19 September 2011) |
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Invited speaker presentation
Abstract not submitted for online publication Genome Biology 2011, 12(Suppl 1):I8 (19 September 2011) |
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Invited speaker presentation
Next-generation clinical sequencing in a children’s hospital Stephen Kingsmore Genome Biology 2011, 12(Suppl 1):I9 (19 September 2011) |
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Invited speaker presentation
A glimpse at tumor genome evolution Elaine R Mardis Genome Biology 2011, 12(Suppl 1):I10 (19 September 2011) |
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Invited speaker presentation
Abstract not submitted for online publication Genome Biology 2011, 12(Suppl 1):I11 (19 September 2011) |
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Invited speaker presentation
Comparative genomic analysis of mouse and human mammary tumors Charles M Perou Genome Biology 2011, 12(Suppl 1):I12 (19 September 2011) |
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Invited speaker presentation
Reconstructing microbial communities Mihai Pop Genome Biology 2011, 12(Suppl 1):I13 (19 September 2011) |
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Invited speaker presentation
Next-generation human genetics Jay Shendure Genome Biology 2011, 12(Suppl 1):I14 (19 September 2011) |
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Invited speaker presentation
Metatranscriptomics of the human gut microbiome Thomas Sichertz Pontén Genome Biology 2011, 12(Suppl 1):I15 (19 September 2011) |
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Invited speaker presentation
Joris A Veltman Genome Biology 2011, 12(Suppl 1):I16 (19 September 2011) |
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Invited speaker presentation
Comparative analysis of the vaginal microbiome in health and disease Bryan A White, Andres M Gomez, Mengfei Ho, Margret Berg Miller, Susan M Thomas, Carl J Yeoman, Suleyman Yildirim, Douglas J Creedon, Tony L Goldberg, Steven R Leigh, Karen E Nelson, Rebecca M Stumpf, Brenda A Wilson Genome Biology 2011, 12(Suppl 1):I17 (19 September 2011) |
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Invited speaker presentation
The Joint Center for Structural Genomics: exploration of the human gut microbiome Ian Wilson Genome Biology 2011, 12(Suppl 1):I18 (19 September 2011) |
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Poster presentation
RNA-Seq methods for imperfect samples: development, evaluation and applications Xian Adiconis, Lin Fan, David DeLuca, Andrey Sivachenko, Nathalie Pochet, Aaron Berlin, Sarah Young, Gad Getz, Aviv Regev, Chad Nusbaum, Andreas Gnirke, Joshua Z Levin Genome Biology 2011, 12(Suppl 1):P1 (19 September 2011) |
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Poster presentation
Viral diversity in children with diarrhea in Gambia Irina Astrovskaya, Bo Liu, Mihai Pop Genome Biology 2011, 12(Suppl 1):P2 (19 September 2011) |
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Poster presentation
COSMIC: the catalogue of somatic mutations in cancer Nidhi Bindal, Simon A Forbes, David Beare, Prasad Gunasekaran, Kenric Leung, Chai Kok, Mingming Jia, Sally Bamford, Charlotte Cole, Sari Ward, Jon Teague, Michael R Stratton, Peter Campbell, Andrew P Futreal Genome Biology 2011, 12(Suppl 1):P3 (19 September 2011) |
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Poster presentation
Yi-Ping Fu, Indu Kohaar, Adam Mumy, Wei Tang, Brian Muchmore, Patricia Porter-Gill, Luyang Liu, Jonine Figueroa, Montserrat Garcia-Closas, Dalsu Baris, Mark Purdue, Michael Thun, Demetrius Albanes, Nuria Malats, Francisco X Real, Manolis Kogevinas, Alison Johnson, Molly Schwenn, Stephen Chanock, Nathaniel Rothman, Debra Silverman, Ludmila Prokunina-Olsson Genome Biology 2011, 12(Suppl 1):P4 (19 September 2011) |
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Poster presentation
Theodore R Gibbons, Gregory T Concepcion, Tsvetan R Bachvaroff, Charles F Delwiche Genome Biology 2011, 12(Suppl 1):P5 (19 September 2011) |
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Poster presentation
Jingwei Jiang, Jun Li, Frederick C Leung Genome Biology 2011, 12(Suppl 1):P6 (19 September 2011) |
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Poster presentation
Functional exploration of Indu Kohaar, Alexandra Scott-Johnson, Yi-Ping Fu, Patricia Porter-Gill, Ludmila Prokunina-Olsson Genome Biology 2011, 12(Suppl 1):P7 (19 September 2011) |
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Poster presentation
ScaffViz: visualizing metagenome assemblies Sergey Koren, Todd Treangen, Mihai Pop Genome Biology 2011, 12(Suppl 1):P8 (19 September 2011) |
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Poster presentation
David M Kristensen, Arcady R Mushegian, Eugene V Koonin Genome Biology 2011, 12(Suppl 1):P9 (19 September 2011) |
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Poster presentation
Lipika R Pal, John Moult Genome Biology 2011, 12(Suppl 1):P10 (19 September 2011) |
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Poster presentation
Accurate and fast estimation of taxonomic profiles from metagenomic shotgun sequences Bo Liu, Theodore Gibbons, Mohammad Ghodsi, Todd Treangen, Mihai Pop Genome Biology 2011, 12(Suppl 1):P11 (19 September 2011) |
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Poster presentation
Abstract not submitted for online publication Genome Biology 2011, 12(Suppl 1):P12 (19 September 2011) |
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Poster presentation
Alan F Rope, Kai Wang, Rune Evjenth, Jinchuan Xing, Jennifer J Johnston, Jeffrey J Swensen, W Johnson, Barry Moore, Chad D Huff, Lynne M Bird, John C Carey, John M Opitz, Cathy A Stevens, Christa Schank, Heidi Fain, Reid Robison, Brian Dalley, Steven Chin, Sarah T South, Theodore J Pysher, Lynn B Jorde, Hakon Hakonarson, Johan R Lillehaug, Leslie G Biesecker, Mark Yandell, Thomas Arnesen, Gholson J Lyon Genome Biology 2011, 12(Suppl 1):P13 (19 September 2011) |
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Poster presentation
Abstract not submitted for online publication Genome Biology 2011, 12(Suppl 1):P14 (19 September 2011) |
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Poster presentation
Adam Mumy, Indu Kohaar, Patricia Porter-Gill, Wei Tang, Yi-Ping Fu, Ludmila Prokunina-Olsson Genome Biology 2011, 12(Suppl 1):P15 (19 September 2011) |
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Poster presentation
Amy L Olex, Brian M Westwood, Leslie B Poole, Jacquelyn S Fetrow Genome Biology 2011, 12(Suppl 1):P16 (19 September 2011) |
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Poster presentation
Metastats: an improved statistical method for analysis of metagenomic data Joseph N Paulson, Mihai Pop, Hector Bravo Genome Biology 2011, 12(Suppl 1):P17 (19 September 2011) |
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Poster presentation
Detection of bladder, breast and prostate cancer using serum and tissue miRNA profiling Patricia Porter-Gill, Yi-Ping Fu, Alpana Kaushiva, Douglas Price, William Dahut, William Figg, Ludmila Prokunina-Olsson Genome Biology 2011, 12(Suppl 1):P18 (19 September 2011) |
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Poster presentation
Wei Tang, Yi-Ping Fu, Jonine D Figueroa, Núria Malats, Montserrat Garcia-Closas, Nilanjan Chatterjee, Manolis Kogevinas, Dalsu Baris, Michael Thun, Jennifer L Hall, Immaculata De Vivo, Demetrius Albanes, Patricia Porter-Gill, Mark P Purdue, Laurie Burdett, Luyang Liu, Amy Hutchinson, Timothy Myers, Adonina Tardón, Consol Serra, Alfredo Carrato, Reina Garcia-Closas, Josep Lloreta, Alison Johnson, Molly Schwenn, Margaret R Karagas, Alan Schned, Amanda Black, Eric J Jacobs, W Diver, Susan M Gapstur, Jarmo Virtamo, David J Hunter, Joseph F Fraumeni, Stephen J Chanock, Debra T Silverman, Nathaniel Rothman, Ludmila Prokunina-Olsson et al. Genome Biology 2011, 12(Suppl 1):P19 (19 September 2011) |
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Poster presentation
A comprehensive census of horizontal gene transfers from prokaryotes to unikonts Pere Puigbò, Sergei Mekhedov, Yuri I Wolf, Eugene V Koonin Genome Biology 2011, 12(Suppl 1):P20 (19 September 2011) |
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Poster presentation
A genetic survival network for glioblastoma multiforme Andy Lin, Desmond J Smith Genome Biology 2011, 12(Suppl 1):P21 (19 September 2011) |
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Poster presentation
Building a protein interaction (PIN) database for autism candidate genes Catherine Swanwick, Sharmila Banerjee-Basu Genome Biology 2011, 12(Suppl 1):P22 (19 September 2011) |
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Poster presentation
Whole transcriptome sequencing of normal and tumor bladder tissue samples Wei Tang, Ludmila Prokunina-Olsson Genome Biology 2011, 12(Suppl 1):P23 (19 September 2011) |
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Poster presentation
McAnthony Tarway, Wei Tang, Ludmila Prokunina-Olsson Genome Biology 2011, 12(Suppl 1):P24 (19 September 2011) |
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Poster presentation
MetAMOS: a metagenomic assembly and analysis pipeline for AMOS Todd J Treangen, Sergey Koren, Irina Astrovskaya, Dan Sommer, Bo Liu, Mihai Pop Genome Biology 2011, 12(Suppl 1):P25 (19 September 2011) |
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Poster presentation
The mutation spectrum in Indian patients with Gaucher disease Vartika Bisariya, Pramod K Mistry, Jun Liu, Madhumita Chaudhari, Neerja Gupta, Madhulika Kabra Genome Biology 2011, 12(Suppl 1):P26 (19 September 2011) |
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Poster presentation
Boundary distinction interpretation of microarray data via discrete correlate summation Brian M Westwood, Amy L Olex, James L Norris, Leslie B Poole, Jacquelyn S Fetrow Genome Biology 2011, 12(Suppl 1):P27 (19 September 2011) |
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Poster presentation
A computational approach to identify transposable element insertions in cancer cells Israel T Silva, Daniel G Pinheiro, Wilson A Silva Genome Biology 2011, 12(Suppl 1):P28 (19 September 2011) |
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Poster presentation
Chen-Hsin Yu, John Moult Genome Biology 2011, 12(Suppl 1):P29 (19 September 2011) |
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Poster presentation
Phylogenomics of prokaryotic ribosomal proteins Natalya Yutin, Kira S Makarova, Yuri I Wolf, Eugene V Koonin Genome Biology 2011, 12(Suppl 1):P30 (19 September 2011) |
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Poster presentation
Justin M Zook, Marc Salit Genome Biology 2011, 12(Suppl 1):P31 (19 September 2011) |
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Poster presentation
Daniel Achinko, Paul Mireji, Flaminia Catteruccia, Dan Masig Genome Biology 2011, 12(Suppl 1):P32 (19 September 2011) |
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Poster presentation
A Coletta, C Molter, R Duqué, D Steenhoff, J Taminau, V de Schaetzen, C Lazar, S Meganck, A Nowé, H Bersini, D Weiss Genome Biology 2011, 12(Suppl 1):P33 (19 September 2011) |
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Poster presentation
Introducing the non-B DNA Motif Search Tool (nBMST) Regina Z Cer, Kevin H Bruce, Duncan E Donohue, Alpay N Temiz, Albino Bacolla, Uma S Mudunuri, Ming Yi, Natalia Volfovsky, Brian T Luke, Jack R Collins, Robert M Stephens Genome Biology 2011, 12(Suppl 1):P34 (19 September 2011) |
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Poster presentation
Chindo Hicks, Ranjit Kumar, Antonio Pannuti, Lucio Miele Genome Biology 2011, 12(Suppl 1):P35 (19 September 2011) |
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Poster presentation
Abstract not submitted for online publication Genome Biology 2011, 12(Suppl 1):P36 (19 September 2011) |
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Poster presentation
An amalgamated risk estimation model (REM) and assay integration into future REMs Peter Cartwright, Erica Ramos, India Bradley, Eric Hanson Genome Biology 2011, 12(Suppl 1):P37 (19 September 2011) |
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Poster presentation
G-CODE: enabling systems medicine through innovative informatics Subha Madhavan, Yuriy Gusev, Michael A Harris, David M Tanenbaum, Robinder Gauba, Krithika Bhuvaneshwar, Andrew Shinohara, Kevin Rosso, Lavinia A Carabet, Lei Song, Rebecca B Riggins, Sivanesan Dakshanamurthy, Yue Wang, Stephen W Byers, Robert Clarke, Louis M Weiner Genome Biology 2011, 12(Suppl 1):P38 (19 September 2011) |
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Poster presentation
Timing chromosomal abnormalities using mutation data Steffen Durinck, Christine Ho, Nicholas J Wang, Wilson Liao, Lakshmi R Jakkula, Eric A Collisson, Jennifer Pons, Sai-Wing Chan, Ernest T Lam, Catherine Chu, Kyunghee Park, Sung-woo Hong, Joe S Hur, Nam Huh, Isaac M Neuhaus, Siegrid S Yu, Roy C Grekin, Theodora M Mauro, James E Cleaver, Pui-Yan Kwok, Philip E LeBoit, Gad Getz, Kristian Cibulskis, Jon C Aster, Haiyan Huang, Elizabeth Purdom, Jian Li, Lars Bolund, Sarah T Arron, Joe W Gray, Paul T Spellman, Raymond J Cho et al. Genome Biology 2011, 12(Suppl 1):P39 (19 September 2011) |
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Poster presentation
RNA-Seq-based transcriptional map of the bovine respiratory disease pathogen Ranjit Kumar, Mark L Lawrence, James Watt, Amanda Cooksey, Shane C Burgess, Bindu Nanduri Genome Biology 2011, 12(Suppl 1):P40 (19 September 2011) |
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Poster presentation
On using optical maps for genome assembly Henry Lin, Mihai Pop Genome Biology 2011, 12(Suppl 1):P41 (19 September 2011) |
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Poster presentation
Mridu Middha, Yungil Kim, Peter Morrell, Chad Myers, Fumiaki Katagiri Genome Biology 2011, 12(Suppl 1):P42 (19 September 2011) |
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Poster presentation
Genomes or exomes: evaluation of cost, time and coverage Sumit Middha, Jeanne L Theis, Adele H Goodloe, Timothy M Olson, Jean-Pierre A Kocher Genome Biology 2011, 12(Suppl 1):P43 (19 September 2011) |
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Poster presentation
Amin A Momin, Brian P James, Thomas C Motter, Humam N Kadara, Garth Powis, Ignacio I Wistuba Genome Biology 2011, 12(Suppl 1):P44 (19 September 2011) |
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Poster presentation
Effective detection of rare variants in pooled DNA samples using cross-pool tail-curve analysis Tejasvi S Niranjan, Abby Adamczyk, Hector Bravo, Margaret A Taub, Sarah J Wheelan, Rafael Irizarry, Tao Wang Genome Biology 2011, 12(Suppl 1):P45 (19 September 2011) |
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Poster presentation
Punit Prabha, Aparna Dixit Genome Biology 2011, 12(Suppl 1):P46 (19 September 2011) |
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Poster presentation
Microbial community function and biomarker discovery in the human microbiome Nicola Segata, Sahar Abubucker, Johannes Goll, Alyxandria M Schubert, Jacques Izard, Brandi L Cantarel, Beltran Rodriguez-Mueller, Levi Waldron, Jeremy Zucker, Mathangi Thiagarajan, Bernard Henrissat, Owen White, Scott T Kelley, Barbara Methé, Patrick D Schloss, Wendy S Garrett, Dirk Gevers, Makedonka Mitreva, Curtis Huttenhower Genome Biology 2011, 12(Suppl 1):P47 (19 September 2011) |
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Poster presentation
Xiaoyu Liu, Sumit Middha, Steven Hart, Asha Nair, Ahmed Hadad, Patrick Duffy, Jean-Pierre Kocher Genome Biology 2011, 12(Suppl 1):P48 (19 September 2011) |
