Articles
Volume 7 Supplement 1
EGASP '05: ENCODE Genome Annotation Assessment Project
Research
Edited by Roderic Guigó, Martin G Reese
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Introduction
Martin G Reese, Roderic Guigó Genome Biology 2006, 7(Suppl 1):S1 (7 August 2006) |
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Review
EGASP: the human ENCODE Genome Annotation Assessment Project Roderic Guigó, Paul Flicek, Josep F Abril, Alexandre Reymond, Julien Lagarde, France Denoeud, Stylianos Antonarakis, Michael Ashburner, Vladimir B Bajic, Ewan Birney, Robert Castelo, Eduardo Eyras, Catherine Ucla, Thomas R Gingeras, Jennifer Harrow, Tim Hubbard, Suzanna E Lewis, Martin G Reese Genome Biology 2006, 7(Suppl 1):S2 (7 August 2006) |
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Review
Performance assessment of promoter predictions on ENCODE regions in the EGASP experiment Vladimir B Bajic, Michael R Brent, Randall H Brown, Adam Frankish, Jennifer Harrow, Uwe Ohler, Victor V Solovyev, Sin Tan Genome Biology 2006, 7(Suppl 1):S3 (7 August 2006) |
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Research
GENCODE: producing a reference annotation for ENCODE Jennifer Harrow, France Denoeud, Adam Frankish, Alexandre Reymond, Chao-Kung Chen, Jacqueline Chrast, Julien Lagarde, James GR Gilbert, Roy Storey, David Swarbreck, Colette Rossier, Catherine Ucla, Tim Hubbard, Stylianos E Antonarakis, Roderic Guigo Genome Biology 2006, 7(Suppl 1):S4 (7 August 2006) |
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Research
Pairagon+N-SCAN_EST: a model-based gene annotation pipeline Manimozhiyan Arumugam, Chaochun Wei, Randall H Brown, Michael R Brent Genome Biology 2006, 7(Suppl 1):S5 (7 August 2006) |
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Research
Vertebrate gene finding from multiple-species alignments using a two-level strategy David Carter, Richard Durbin Genome Biology 2006, 7(Suppl 1):S6 (7 August 2006) |
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Research
Exogean: a framework for annotating protein-coding genes in eukaryotic genomic DNA Sarah Djebali, Franck Delaplace, Hugues Crollius Genome Biology 2006, 7(Suppl 1):S7 (7 August 2006) |
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Research
Paul Flicek, Michael R Brent Genome Biology 2006, 7(Suppl 1):S8 (7 August 2006) |
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Research
JIGSAW, GeneZilla, and GlimmerHMM: puzzling out the features of human genes in the ENCODE regions Jonathan E Allen, William H Majoros, Mihaela Pertea, Steven L Salzberg Genome Biology 2006, 7(Suppl 1):S9 (7 August 2006) |
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Research
Automatic annotation of eukaryotic genes, pseudogenes and promoters Victor Solovyev, Peter Kosarev, Igor Seledsov, Denis Vorobyev Genome Biology 2006, 7(Suppl 1):S10 (7 August 2006) |
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Research
Mario Stanke, Ana Tzvetkova, Burkhard Morgenstern Genome Biology 2006, 7(Suppl 1):S11 (7 August 2006) |
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Research
AceView: a comprehensive cDNA-supported gene and transcripts annotation Danielle Thierry-Mieg, Jean Thierry-Mieg Genome Biology 2006, 7(Suppl 1):S12 (7 August 2006) |
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Research
A computational approach for identifying pseudogenes in the ENCODE regions Deyou Zheng, Mark B Gerstein Genome Biology 2006, 7(Suppl 1):S13 (7 August 2006) |
